Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gm9132-201ENSMUST00000210182 832 ntBASIC9.59□□□□□ -0.87
Znf48Q3US17 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC9.59□□□□□ -0.87
Znf48Q3US17 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC9.59□□□□□ -0.87
Znf48Q3US17 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.59□□□□□ -0.87
Znf48Q3US17 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Znf48Q3US17 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 Ginm1-202ENSMUST00000065124 300 ntBASIC9.59□□□□□ -0.87
Znf48Q3US17 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Znf48Q3US17 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.59□□□□□ -0.87
Znf48Q3US17 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.59□□□□□ -0.87
Znf48Q3US17 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.59□□□□□ -0.87
Znf48Q3US17 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.59□□□□□ -0.87
Znf48Q3US17 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.59□□□□□ -0.87
Znf48Q3US17 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
Znf48Q3US17 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.59□□□□□ -0.87
Znf48Q3US17 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Znf48Q3US17 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Znf48Q3US17 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.88
Znf48Q3US17 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm5530-201ENSMUST00000117185 985 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm7851-201ENSMUST00000117574 323 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm12105-201ENSMUST00000120846 779 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm7211-201ENSMUST00000172692 1118 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm25072-201ENSMUST00000175233 235 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm38154-201ENSMUST00000195444 340 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm42640-201ENSMUST00000199792 1195 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm43596-201ENSMUST00000202818 884 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm17827-201ENSMUST00000211825 742 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 AC162934.3-201ENSMUST00000223015 841 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 AC156574.1-201ENSMUST00000227084 452 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 AC105408.1-201ENSMUST00000227771 802 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm9873-201ENSMUST00000063891 1097 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.58□□□□□ -0.88
Znf48Q3US17 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Znf48Q3US17 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Znf48Q3US17 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 247.6 ms