Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b2Q3UJB0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sf3b2Q3UJB0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sf3b2Q3UJB0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Sf3b2Q3UJB0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sf3b2Q3UJB0 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Sf3b2Q3UJB0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Gm45124-201ENSMUST00000206723 2755 ntBASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Gm29101-201ENSMUST00000188329 1471 ntBASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Gm11919-201ENSMUST00000117609 721 ntBASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 AA623943-201ENSMUST00000121794 354 ntBASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Gm17799-201ENSMUST00000183270 667 ntBASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b2Q3UJB0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Gm27833-201ENSMUST00000184285 124 ntBASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Gm38145-201ENSMUST00000192319 693 ntBASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Gm5311-201ENSMUST00000203518 709 ntBASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Gm18124-201ENSMUST00000210695 706 ntBASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 AC129017.2-201ENSMUST00000226118 1284 ntBASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Gm23458-201ENSMUST00000083257 169 ntBASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC14.44□□□□□ -0.1
Sf3b2Q3UJB0 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms