Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ctdnep1Q3TP92 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.83□□□□□ -0.36
Ctdnep1Q3TP92 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdnep1Q3TP92 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.83□□□□□ -0.36
Ctdnep1Q3TP92 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.83□□□□□ -0.36
Ctdnep1Q3TP92 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdnep1Q3TP92 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ctdnep1Q3TP92 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ctdnep1Q3TP92 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Gm12986-201ENSMUST00000119037 967 ntBASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Gm3828-201ENSMUST00000121817 257 ntBASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Mir1896-201ENSMUST00000122641 81 ntBASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Gm23771-201ENSMUST00000178702 110 ntBASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdnep1Q3TP92 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Platr10-202ENSMUST00000191479 818 ntBASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Gm45118-201ENSMUST00000208928 825 ntBASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Gm30671-201ENSMUST00000214898 318 ntBASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Gm10020-201ENSMUST00000081993 612 ntBASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdnep1Q3TP92 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ctdnep1Q3TP92 Gm12663-201ENSMUST00000118481 958 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms