Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Mir6927-201ENSMUST00000184494 71 ntBASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Gm18038-201ENSMUST00000197900 485 ntBASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Gm12217-201ENSMUST00000118858 696 ntBASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Gm38321-201ENSMUST00000195053 235 ntBASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.82□□□□□ -0.52
Trim43aQ3TL54 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.82□□□□□ -0.52
Trim43aQ3TL54 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim43aQ3TL54 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms