Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.07□□□□□ -0.48
Col9a2Q07643 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.07□□□□□ -0.48
Col9a2Q07643 Mir6941-201ENSMUST00000184711 59 ntBASIC12.07□□□□□ -0.48
Col9a2Q07643 Gm42433-201ENSMUST00000196806 940 ntBASIC12.07□□□□□ -0.48
Col9a2Q07643 Gm7880-201ENSMUST00000203748 871 ntBASIC12.07□□□□□ -0.48
Col9a2Q07643 Gm45258-201ENSMUST00000210042 853 ntBASIC12.07□□□□□ -0.48
Col9a2Q07643 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Gm18035-201ENSMUST00000211962 589 ntBASIC12.07□□□□□ -0.48
Col9a2Q07643 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col9a2Q07643 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.06□□□□□ -0.48
Col9a2Q07643 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm15620-201ENSMUST00000122949 270 ntBASIC12.06□□□□□ -0.48
Col9a2Q07643 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm44647-201ENSMUST00000207402 428 ntBASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.06□□□□□ -0.48
Col9a2Q07643 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col9a2Q07643 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.05□□□□□ -0.48
Col9a2Q07643 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col9a2Q07643 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm24791-201ENSMUST00000104284 131 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm12463-201ENSMUST00000118271 849 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm12943-201ENSMUST00000119616 210 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.05□□□□□ -0.48
Col9a2Q07643 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col9a2Q07643 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms