Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Mir1249-201ENSMUST00000116791 98 ntBASIC14□□□□□ -0.17
Smarcc1P97496 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC14□□□□□ -0.17
Smarcc1P97496 Gm25288-201ENSMUST00000122800 265 ntBASIC14□□□□□ -0.17
Smarcc1P97496 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smarcc1P97496 Gm4462-201ENSMUST00000166453 492 ntBASIC14□□□□□ -0.17
Smarcc1P97496 Gm20493-201ENSMUST00000173706 213 ntBASIC14□□□□□ -0.17
Smarcc1P97496 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC14□□□□□ -0.17
Smarcc1P97496 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC14□□□□□ -0.17
Smarcc1P97496 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC14□□□□□ -0.17
Smarcc1P97496 Gm7904-201ENSMUST00000217049 465 ntBASIC14□□□□□ -0.17
Smarcc1P97496 Nsmce2-203ENSMUST00000227173 1122 ntBASIC14□□□□□ -0.17
Smarcc1P97496 AC154213.1-201ENSMUST00000228234 583 ntBASIC14□□□□□ -0.17
Smarcc1P97496 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC14□□□□□ -0.17
Smarcc1P97496 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Smarcc1P97496 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC14□□□□□ -0.17
Smarcc1P97496 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smarcc1P97496 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.99□□□□□ -0.17
Smarcc1P97496 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 AC154354.1-203ENSMUST00000225565 1364 ntBASIC13.99□□□□□ -0.17
Smarcc1P97496 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Smarcc1P97496 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Gm5944-201ENSMUST00000118182 1001 ntBASIC13.99□□□□□ -0.17
Smarcc1P97496 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smarcc1P97496 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Zcwpw2-203ENSMUST00000187803 372 ntBASIC13.99□□□□□ -0.17
Smarcc1P97496 Gm45258-201ENSMUST00000210042 853 ntBASIC13.99□□□□□ -0.17
Smarcc1P97496 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC13.99□□□□□ -0.17
Smarcc1P97496 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.99□□□□□ -0.17
Smarcc1P97496 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC13.99□□□□□ -0.17
Smarcc1P97496 CT030195.2-201ENSMUST00000226074 1286 ntBASIC13.99□□□□□ -0.17
Smarcc1P97496 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.99□□□□□ -0.17
Smarcc1P97496 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.99□□□□□ -0.17
Smarcc1P97496 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Smarcc1P97496 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smarcc1P97496 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smarcc1P97496 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc1P97496 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcc1P97496 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.98□□□□□ -0.17
Smarcc1P97496 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.98□□□□□ -0.17
Smarcc1P97496 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Gm17836-201ENSMUST00000191976 1302 ntBASIC13.98□□□□□ -0.17
Smarcc1P97496 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Ighv13-1-201ENSMUST00000103480 294 ntBASIC13.98□□□□□ -0.17
Smarcc1P97496 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Gm24933-201ENSMUST00000103762 110 ntBASIC13.98□□□□□ -0.17
Smarcc1P97496 Gm23252-201ENSMUST00000103776 110 ntBASIC13.98□□□□□ -0.17
Smarcc1P97496 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.98□□□□□ -0.17
Smarcc1P97496 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Gm4943-201ENSMUST00000132879 424 ntBASIC13.98□□□□□ -0.17
Smarcc1P97496 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Gm5808-201ENSMUST00000178090 357 ntBASIC13.98□□□□□ -0.17
Smarcc1P97496 Gm26443-201ENSMUST00000179610 110 ntBASIC13.98□□□□□ -0.17
Smarcc1P97496 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC13.98□□□□□ -0.17
Smarcc1P97496 Ighv1-70-201ENSMUST00000196509 351 ntBASIC13.98□□□□□ -0.17
Smarcc1P97496 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc1P97496 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 149.6 ms