Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nphp4P59240 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nphp4P59240 Gm6768-201ENSMUST00000022467 1878 ntBASIC14.99□□□□□ -0.01
Nphp4P59240 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nphp4P59240 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.98□□□□□ -0.01
Nphp4P59240 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nphp4P59240 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.98□□□□□ -0.01
Nphp4P59240 Gm11544-201ENSMUST00000120215 382 ntBASIC14.98□□□□□ -0.01
Nphp4P59240 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC14.98□□□□□ -0.01
Nphp4P59240 Gm20493-201ENSMUST00000173706 213 ntBASIC14.98□□□□□ -0.01
Nphp4P59240 Gm27316-201ENSMUST00000184884 277 ntBASIC14.98□□□□□ -0.01
Nphp4P59240 Gm37207-201ENSMUST00000194284 296 ntBASIC14.98□□□□□ -0.01
Nphp4P59240 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC14.98□□□□□ -0.01
Nphp4P59240 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC14.98□□□□□ -0.01
Nphp4P59240 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC14.98□□□□□ -0.01
Nphp4P59240 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nphp4P59240 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Gm5472-201ENSMUST00000178604 1678 ntBASIC14.98□□□□□ -0.01
Nphp4P59240 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nphp4P59240 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nphp4P59240 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nphp4P59240 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nphp4P59240 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.97□□□□□ -0.01
Nphp4P59240 Gm13104-201ENSMUST00000119651 1446 ntBASIC14.97□□□□□ -0.01
Nphp4P59240 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC14.97□□□□□ -0.01
Nphp4P59240 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nphp4P59240 Mir8111-201ENSMUST00000184463 137 ntBASIC14.97□□□□□ -0.01
Nphp4P59240 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC14.97□□□□□ -0.01
Nphp4P59240 Ighv1-2-201ENSMUST00000195325 378 ntBASIC14.97□□□□□ -0.01
Nphp4P59240 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nphp4P59240 Rps3a2-201ENSMUST00000074245 792 ntBASIC14.97□□□□□ -0.01
Nphp4P59240 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nphp4P59240 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Nphp4P59240 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nphp4P59240 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nphp4P59240 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nphp4P59240 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Gm45677-201ENSMUST00000209975 1341 ntBASIC14.96□□□□□ -0.01
Nphp4P59240 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC14.96□□□□□ -0.01
Nphp4P59240 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nphp4P59240 Gm13094-201ENSMUST00000117930 409 ntBASIC14.96□□□□□ -0.01
Nphp4P59240 Gm12418-201ENSMUST00000118116 942 ntBASIC14.96□□□□□ -0.01
Nphp4P59240 Gm14052-201ENSMUST00000121434 1031 ntBASIC14.96□□□□□ -0.01
Nphp4P59240 Gm16441-201ENSMUST00000138176 924 ntBASIC14.96□□□□□ -0.01
Nphp4P59240 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC14.96□□□□□ -0.01
Nphp4P59240 Gm6038-201ENSMUST00000154310 948 ntBASIC14.96□□□□□ -0.01
Nphp4P59240 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Nphp4P59240 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Nphp4P59240 Gm7445-201ENSMUST00000192115 340 ntBASIC14.96□□□□□ -0.01
Nphp4P59240 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms