Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Sox2P48432 Mir8109-201ENSMUST00000184375 117 ntBASIC10.41□□□□□ -0.74
Sox2P48432 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.41□□□□□ -0.74
Sox2P48432 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.41□□□□□ -0.74
Sox2P48432 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Gm8913-201ENSMUST00000209491 641 ntBASIC10.41□□□□□ -0.74
Sox2P48432 Gm13097-201ENSMUST00000210722 397 ntBASIC10.41□□□□□ -0.74
Sox2P48432 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Gm6867-201ENSMUST00000219165 425 ntBASIC10.41□□□□□ -0.74
Sox2P48432 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.41□□□□□ -0.74
Sox2P48432 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.41□□□□□ -0.74
Sox2P48432 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.41□□□□□ -0.74
Sox2P48432 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Sox2P48432 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Sox2P48432 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Sox2P48432 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.41□□□□□ -0.74
Sox2P48432 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Sox2P48432 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Sox2P48432 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sox2P48432 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Sox2P48432 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.4□□□□□ -0.74
Sox2P48432 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.4□□□□□ -0.74
Sox2P48432 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.4□□□□□ -0.74
Sox2P48432 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.4□□□□□ -0.74
Sox2P48432 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Sox2P48432 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Sox2P48432 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Sox2P48432 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sox2P48432 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.4□□□□□ -0.74
Sox2P48432 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.4□□□□□ -0.74
Sox2P48432 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.4□□□□□ -0.74
Sox2P48432 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.4□□□□□ -0.74
Sox2P48432 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sox2P48432 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Gm18038-201ENSMUST00000197900 485 ntBASIC10.4□□□□□ -0.74
Sox2P48432 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.4□□□□□ -0.74
Sox2P48432 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Gm44967-201ENSMUST00000207047 631 ntBASIC10.4□□□□□ -0.74
Sox2P48432 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.4□□□□□ -0.74
Sox2P48432 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.4□□□□□ -0.74
Sox2P48432 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Sox2P48432 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sox2P48432 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Sox2P48432 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Sox2P48432 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.39□□□□□ -0.75
Sox2P48432 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.39□□□□□ -0.75
Sox2P48432 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sox2P48432 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sox2P48432 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.39□□□□□ -0.75
Sox2P48432 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sox2P48432 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sox2P48432 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sox2P48432 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sox2P48432 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Sox2P48432 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sox2P48432 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sox2P48432 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sox2P48432 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sox2P48432 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sox2P48432 Gm13665-201ENSMUST00000120830 528 ntBASIC10.39□□□□□ -0.75
Sox2P48432 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.39□□□□□ -0.75
Sox2P48432 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.39□□□□□ -0.75
Sox2P48432 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.39□□□□□ -0.75
Sox2P48432 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms