Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Rfx3P48381 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.09□□□□□ -0.79
Rfx3P48381 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.09□□□□□ -0.79
Rfx3P48381 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.09□□□□□ -0.79
Rfx3P48381 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.09□□□□□ -0.79
Rfx3P48381 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.09□□□□□ -0.79
Rfx3P48381 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.09□□□□□ -0.79
Rfx3P48381 Gm6905-201ENSMUST00000205729 511 ntBASIC10.09□□□□□ -0.79
Rfx3P48381 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.09□□□□□ -0.79
Rfx3P48381 Ntng1-201ENSMUST00000051253 327 ntBASIC10.09□□□□□ -0.79
Rfx3P48381 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Rfx3P48381 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Rfx3P48381 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Rfx3P48381 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Rfx3P48381 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Rfx3P48381 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Rfx3P48381 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Rfx3P48381 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Rfx3P48381 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Rfx3P48381 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
Rfx3P48381 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Gm11450-201ENSMUST00000121144 333 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.08□□□□□ -0.8
Rfx3P48381 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Gm8459-201ENSMUST00000162504 760 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.08□□□□□ -0.8
Rfx3P48381 Gm27341-201ENSMUST00000183570 106 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.08□□□□□ -0.8
Rfx3P48381 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.08□□□□□ -0.8
Rfx3P48381 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Rfx3P48381 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Rfx3P48381 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Rfx3P48381 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Rfx3P48381 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rfx3P48381 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.08□□□□□ -0.8
Rfx3P48381 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.07□□□□□ -0.8
Rfx3P48381 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms