Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rfx1P48377 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rfx1P48377 Gm25148-201ENSMUST00000104611 123 ntBASIC13.29□□□□□ -0.28
Rfx1P48377 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rfx1P48377 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rfx1P48377 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.29□□□□□ -0.28
Rfx1P48377 Gm24749-201ENSMUST00000157838 343 ntBASIC13.29□□□□□ -0.28
Rfx1P48377 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rfx1P48377 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.29□□□□□ -0.28
Rfx1P48377 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rfx1P48377 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.29□□□□□ -0.28
Rfx1P48377 Gm45433-201ENSMUST00000209386 247 ntBASIC13.29□□□□□ -0.28
Rfx1P48377 Gm45856-201ENSMUST00000212752 416 ntBASIC13.29□□□□□ -0.28
Rfx1P48377 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Gm3372-201ENSMUST00000198806 1792 ntBASIC13.29□□□□□ -0.28
Rfx1P48377 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Phtf1os-201ENSMUST00000160110 4046 ntBASIC13.29□□□□□ -0.28
Rfx1P48377 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rfx1P48377 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rfx1P48377 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx1P48377 Gm38357-201ENSMUST00000195382 2464 ntBASIC13.29□□□□□ -0.28
Rfx1P48377 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rfx1P48377 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx1P48377 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 CT868720.1-201ENSMUST00000223069 2544 ntBASIC13.28□□□□□ -0.28
Rfx1P48377 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rfx1P48377 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.28□□□□□ -0.28
Rfx1P48377 Gm11573-201ENSMUST00000119956 394 ntBASIC13.28□□□□□ -0.28
Rfx1P48377 Gm23958-201ENSMUST00000157207 105 ntBASIC13.28□□□□□ -0.28
Rfx1P48377 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Gm8815-201ENSMUST00000173809 620 ntBASIC13.28□□□□□ -0.28
Rfx1P48377 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rfx1P48377 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.28□□□□□ -0.28
Rfx1P48377 Gm38266-201ENSMUST00000194931 421 ntBASIC13.28□□□□□ -0.28
Rfx1P48377 Gm43758-201ENSMUST00000199500 367 ntBASIC13.28□□□□□ -0.28
Rfx1P48377 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx1P48377 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.28□□□□□ -0.28
Rfx1P48377 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.28□□□□□ -0.28
Rfx1P48377 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Gm45675-201ENSMUST00000211202 3429 ntBASIC13.28□□□□□ -0.28
Rfx1P48377 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx1P48377 Gm43375-201ENSMUST00000196705 2480 ntBASIC13.28□□□□□ -0.28
Rfx1P48377 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx1P48377 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Rfx1P48377 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx1P48377 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx1P48377 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx1P48377 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx1P48377 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx1P48377 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx1P48377 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx1P48377 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx1P48377 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.27□□□□□ -0.28
Rfx1P48377 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC13.27□□□□□ -0.28
Rfx1P48377 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx1P48377 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx1P48377 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx1P48377 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx1P48377 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rfx1P48377 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Rfx1P48377 Gm8566-201ENSMUST00000120174 465 ntBASIC13.27□□□□□ -0.29
Rfx1P48377 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.27□□□□□ -0.29
Rfx1P48377 Gm14381-201ENSMUST00000122105 414 ntBASIC13.27□□□□□ -0.29
Rfx1P48377 Mir1896-201ENSMUST00000122641 81 ntBASIC13.27□□□□□ -0.29
Rfx1P48377 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Rfx1P48377 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx1P48377 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rfx1P48377 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.27□□□□□ -0.29
Rfx1P48377 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.27□□□□□ -0.29
Rfx1P48377 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.27□□□□□ -0.29
Rfx1P48377 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx1P48377 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.27□□□□□ -0.29
Rfx1P48377 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.27□□□□□ -0.29
Rfx1P48377 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.27□□□□□ -0.29
Rfx1P48377 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rfx1P48377 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms