Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.63□□□□□ -0.71
Slc6a11P31650 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc6a11P31650 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc6a11P31650 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc6a11P31650 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.63□□□□□ -0.71
Slc6a11P31650 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc6a11P31650 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.63□□□□□ -0.71
Slc6a11P31650 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.63□□□□□ -0.71
Slc6a11P31650 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Slc6a11P31650 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.63□□□□□ -0.71
Slc6a11P31650 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a11P31650 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Slc6a11P31650 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc6a11P31650 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.62□□□□□ -0.71
Slc6a11P31650 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Slc6a11P31650 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Slc6a11P31650 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.62□□□□□ -0.71
Slc6a11P31650 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Slc6a11P31650 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm13047-201ENSMUST00000117116 815 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm11783-201ENSMUST00000119549 885 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.62□□□□□ -0.71
Slc6a11P31650 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.62□□□□□ -0.71
Slc6a11P31650 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm23153-201ENSMUST00000175323 313 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm28686-201ENSMUST00000187404 609 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm34023-201ENSMUST00000195539 217 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm2965-201ENSMUST00000198365 343 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm2517-201ENSMUST00000215651 348 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.62□□□□□ -0.71
Slc6a11P31650 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.62□□□□□ -0.71
Slc6a11P31650 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Slc6a11P31650 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a11P31650 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a11P31650 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a11P31650 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.61□□□□□ -0.71
Slc6a11P31650 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a11P31650 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.61□□□□□ -0.71
Slc6a11P31650 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a11P31650 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a11P31650 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a11P31650 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms