Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC10.22□□□□□ -0.77
Nedd8P29595 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nedd8P29595 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.21□□□□□ -0.77
Nedd8P29595 AC156802.2-203ENSMUST00000226032 1906 ntBASIC10.21□□□□□ -0.77
Nedd8P29595 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Nedd8P29595 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.21□□□□□ -0.77
Nedd8P29595 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Nedd8P29595 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Nedd8P29595 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.21□□□□□ -0.77
Nedd8P29595 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.21□□□□□ -0.77
Nedd8P29595 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.21□□□□□ -0.77
Nedd8P29595 Gm4857-201ENSMUST00000192718 785 ntBASIC10.21□□□□□ -0.77
Nedd8P29595 Gm6450-201ENSMUST00000200896 574 ntBASIC10.21□□□□□ -0.77
Nedd8P29595 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nedd8P29595 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Nedd8P29595 Gm6091-201ENSMUST00000098307 165 ntBASIC10.21□□□□□ -0.77
Nedd8P29595 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nedd8P29595 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.21□□□□□ -0.78
Nedd8P29595 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Nedd8P29595 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.21□□□□□ -0.78
Nedd8P29595 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nedd8P29595 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nedd8P29595 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nedd8P29595 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nedd8P29595 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.21□□□□□ -0.78
Nedd8P29595 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nedd8P29595 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.21□□□□□ -0.78
Nedd8P29595 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nedd8P29595 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nedd8P29595 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nedd8P29595 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Nedd8P29595 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nedd8P29595 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nedd8P29595 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nedd8P29595 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.2□□□□□ -0.78
Nedd8P29595 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nedd8P29595 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nedd8P29595 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.2□□□□□ -0.78
Nedd8P29595 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nedd8P29595 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Gm13140-201ENSMUST00000119840 3151 ntBASIC10.2□□□□□ -0.78
Nedd8P29595 Gm16177-201ENSMUST00000120728 718 ntBASIC10.2□□□□□ -0.78
Nedd8P29595 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nedd8P29595 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.2□□□□□ -0.78
Nedd8P29595 Gm27892-201ENSMUST00000185017 106 ntBASIC10.2□□□□□ -0.78
Nedd8P29595 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.2□□□□□ -0.78
Nedd8P29595 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.2□□□□□ -0.78
Nedd8P29595 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.2□□□□□ -0.78
Nedd8P29595 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.2□□□□□ -0.78
Nedd8P29595 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Nedd8P29595 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nedd8P29595 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Nedd8P29595 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nedd8P29595 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC10.19□□□□□ -0.78
Nedd8P29595 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nedd8P29595 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.19□□□□□ -0.78
Nedd8P29595 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.19□□□□□ -0.78
Nedd8P29595 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nedd8P29595 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms