Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.79□□□□□ -0.36
Vcam1P29533 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.79□□□□□ -0.36
Vcam1P29533 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC12.79□□□□□ -0.36
Vcam1P29533 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.79□□□□□ -0.36
Vcam1P29533 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.79□□□□□ -0.36
Vcam1P29533 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.79□□□□□ -0.36
Vcam1P29533 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.79□□□□□ -0.36
Vcam1P29533 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC12.79□□□□□ -0.36
Vcam1P29533 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.79□□□□□ -0.36
Vcam1P29533 Gm44498-201ENSMUST00000199509 111 ntBASIC12.79□□□□□ -0.36
Vcam1P29533 Gm5302-201ENSMUST00000202130 796 ntBASIC12.79□□□□□ -0.36
Vcam1P29533 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Gm18042-201ENSMUST00000219887 790 ntBASIC12.79□□□□□ -0.36
Vcam1P29533 Gm9791-201ENSMUST00000060997 447 ntBASIC12.79□□□□□ -0.36
Vcam1P29533 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vcam1P29533 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.79□□□□□ -0.36
Vcam1P29533 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vcam1P29533 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Vcam1P29533 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.79□□□□□ -0.36
Vcam1P29533 Gm42858-201ENSMUST00000202512 1704 ntBASIC12.79□□□□□ -0.36
Vcam1P29533 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vcam1P29533 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vcam1P29533 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcam1P29533 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.79□□□□□ -0.36
Vcam1P29533 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vcam1P29533 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vcam1P29533 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vcam1P29533 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vcam1P29533 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vcam1P29533 Gm23745-201ENSMUST00000104230 125 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.78□□□□□ -0.36
Vcam1P29533 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC12.78□□□□□ -0.36
Vcam1P29533 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.78□□□□□ -0.36
Vcam1P29533 Gm37723-201ENSMUST00000194480 565 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vcam1P29533 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 BC080696-201ENSMUST00000202858 1218 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.78□□□□□ -0.36
Vcam1P29533 Gm8170-201ENSMUST00000218581 945 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 AC164556.1-201ENSMUST00000221318 751 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vcam1P29533 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vcam1P29533 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vcam1P29533 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.78□□□□□ -0.36
Vcam1P29533 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.78□□□□□ -0.36
Vcam1P29533 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcam1P29533 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms