Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nckap1P28660 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.16□□□□□ -0.62
Nckap1P28660 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.15□□□□□ -0.62
Nckap1P28660 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.15□□□□□ -0.62
Nckap1P28660 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nckap1P28660 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.15□□□□□ -0.62
Nckap1P28660 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nckap1P28660 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Gm4917-201ENSMUST00000121452 650 ntBASIC11.15□□□□□ -0.62
Nckap1P28660 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.15□□□□□ -0.62
Nckap1P28660 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.15□□□□□ -0.62
Nckap1P28660 Gm9369-201ENSMUST00000196009 733 ntBASIC11.15□□□□□ -0.62
Nckap1P28660 Gm30946-201ENSMUST00000198288 724 ntBASIC11.15□□□□□ -0.62
Nckap1P28660 Gm43002-201ENSMUST00000200310 155 ntBASIC11.15□□□□□ -0.62
Nckap1P28660 Gm18460-201ENSMUST00000208088 464 ntBASIC11.15□□□□□ -0.62
Nckap1P28660 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Nckap1P28660 Gm6390-201ENSMUST00000215034 589 ntBASIC11.15□□□□□ -0.62
Nckap1P28660 Lect2-202ENSMUST00000225183 823 ntBASIC11.15□□□□□ -0.62
Nckap1P28660 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.15□□□□□ -0.62
Nckap1P28660 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nckap1P28660 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.15□□□□□ -0.62
Nckap1P28660 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.15□□□□□ -0.62
Nckap1P28660 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.15□□□□□ -0.62
Nckap1P28660 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.15□□□□□ -0.62
Nckap1P28660 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nckap1P28660 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nckap1P28660 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nckap1P28660 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Nckap1P28660 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nckap1P28660 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nckap1P28660 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nckap1P28660 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nckap1P28660 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nckap1P28660 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nckap1P28660 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nckap1P28660 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Gm13549-201ENSMUST00000118339 796 ntBASIC11.14□□□□□ -0.63
Nckap1P28660 Gm14234-201ENSMUST00000119539 845 ntBASIC11.14□□□□□ -0.63
Nckap1P28660 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nckap1P28660 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.14□□□□□ -0.63
Nckap1P28660 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.14□□□□□ -0.63
Nckap1P28660 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.14□□□□□ -0.63
Nckap1P28660 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Gm9353-201ENSMUST00000200472 604 ntBASIC11.14□□□□□ -0.63
Nckap1P28660 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.14□□□□□ -0.63
Nckap1P28660 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.14□□□□□ -0.63
Nckap1P28660 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nckap1P28660 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.14□□□□□ -0.63
Nckap1P28660 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nckap1P28660 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Nckap1P28660 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.14□□□□□ -0.63
Nckap1P28660 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.14□□□□□ -0.63
Nckap1P28660 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms