Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf1bP25119 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm25766-201ENSMUST00000104101 131 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm26013-201ENSMUST00000104404 119 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm8312-201ENSMUST00000119380 618 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm24398-201ENSMUST00000157870 109 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm24514-201ENSMUST00000174961 285 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm44323-201ENSMUST00000198689 129 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm42657-201ENSMUST00000201746 211 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 CT025642.1-201ENSMUST00000224734 1219 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1bP25119 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Gm42651-201ENSMUST00000199851 1339 ntBASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Gm22138-201ENSMUST00000158748 128 ntBASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Gm43163-201ENSMUST00000196571 442 ntBASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Gm18561-201ENSMUST00000206027 804 ntBASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.36□□□□□ -0.75
Tnfrsf1bP25119 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms