Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PdgfrbP05622 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Gm23272-201ENSMUST00000104053 129 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Gm12218-201ENSMUST00000117666 399 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Gm13408-201ENSMUST00000119822 798 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Gm13935-201ENSMUST00000121859 798 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Gm28195-201ENSMUST00000186992 372 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Gm28925-201ENSMUST00000188586 168 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.36□□□□□ -0.59
PdgfrbP05622 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
PdgfrbP05622 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdgfrbP05622 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
PdgfrbP05622 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Gm25076-201ENSMUST00000104098 132 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Gm8737-201ENSMUST00000122208 642 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.35□□□□□ -0.59
PdgfrbP05622 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 Gm21092-201ENSMUST00000178995 955 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 Mir7051-201ENSMUST00000184167 73 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 Gm29067-201ENSMUST00000190821 470 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Gm37284-201ENSMUST00000193607 539 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 Gm43138-201ENSMUST00000199123 708 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.35□□□□□ -0.59
PdgfrbP05622 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.35□□□□□ -0.59
PdgfrbP05622 Gm42867-201ENSMUST00000202995 469 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
PdgfrbP05622 Gm5468-202ENSMUST00000227851 682 ntBASIC11.35□□□□□ -0.59
PdgfrbP05622 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PdgfrbP05622 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
PdgfrbP05622 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
PdgfrbP05622 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms