Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
P04224 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.78□□□□□ -0.84
P04224 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.78□□□□□ -0.84
P04224 Gm18187-201ENSMUST00000196476 984 ntBASIC9.78□□□□□ -0.84
P04224 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
P04224 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
P04224 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.78□□□□□ -0.84
P04224 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
P04224 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
P04224 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.78□□□□□ -0.84
P04224 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
P04224 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.78□□□□□ -0.84
P04224 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
P04224 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.78□□□□□ -0.84
P04224 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
P04224 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
P04224 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
P04224 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
P04224 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
P04224 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.77□□□□□ -0.84
P04224 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
P04224 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
P04224 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
P04224 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.77□□□□□ -0.85
P04224 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.77□□□□□ -0.85
P04224 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.77□□□□□ -0.85
P04224 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
P04224 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
P04224 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.77□□□□□ -0.85
P04224 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.77□□□□□ -0.85
P04224 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
P04224 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Gm27572-201ENSMUST00000183702 255 ntBASIC9.77□□□□□ -0.85
P04224 Gm3096-201ENSMUST00000185770 364 ntBASIC9.77□□□□□ -0.85
P04224 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.77□□□□□ -0.85
P04224 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Gm8956-201ENSMUST00000203939 825 ntBASIC9.77□□□□□ -0.85
P04224 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
P04224 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.77□□□□□ -0.85
P04224 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Gm9823-201ENSMUST00000051212 327 ntBASIC9.77□□□□□ -0.85
P04224 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
P04224 Pml-201ENSMUST00000085673 4481 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
P04224 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.77□□□□□ -0.85
P04224 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.77□□□□□ -0.85
P04224 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.77□□□□□ -0.85
P04224 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
P04224 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04224 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.77□□□□□ -0.85
P04224 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
P04224 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.77□□□□□ -0.85
P04224 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.76□□□□□ -0.85
P04224 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
P04224 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04224 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms