Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gm5455-201ENSMUST00000058710 715 ntBASIC10.48□□□□□ -0.73
Krt1P04104 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Krt1P04104 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Gm10312-201ENSMUST00000078515 489 ntBASIC10.48□□□□□ -0.73
Krt1P04104 Snora73a-201ENSMUST00000082453 205 ntBASIC10.48□□□□□ -0.73
Krt1P04104 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.48□□□□□ -0.73
Krt1P04104 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Krt1P04104 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Krt1P04104 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.48□□□□□ -0.73
Krt1P04104 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Krt1P04104 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Krt1P04104 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Krt1P04104 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Krt1P04104 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC10.47□□□□□ -0.73
Krt1P04104 Gm26286-201ENSMUST00000104166 134 ntBASIC10.47□□□□□ -0.73
Krt1P04104 Gm4986-201ENSMUST00000119731 549 ntBASIC10.47□□□□□ -0.73
Krt1P04104 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.47□□□□□ -0.73
Krt1P04104 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.47□□□□□ -0.73
Krt1P04104 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.47□□□□□ -0.73
Krt1P04104 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.47□□□□□ -0.73
Krt1P04104 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Gm38117-201ENSMUST00000194653 939 ntBASIC10.47□□□□□ -0.73
Krt1P04104 Gm43118-201ENSMUST00000199149 775 ntBASIC10.47□□□□□ -0.73
Krt1P04104 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.47□□□□□ -0.73
Krt1P04104 Gm5035-201ENSMUST00000215581 927 ntBASIC10.47□□□□□ -0.73
Krt1P04104 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.47□□□□□ -0.73
Krt1P04104 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.47□□□□□ -0.73
Krt1P04104 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.47□□□□□ -0.73
Krt1P04104 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Krt1P04104 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Krt1P04104 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Krt1P04104 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Krt1P04104 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Krt1P04104 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Krt1P04104 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC10.46□□□□□ -0.73
Krt1P04104 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Krt1P04104 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Krt1P04104 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Krt1P04104 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Krt1P04104 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC10.46□□□□□ -0.73
Krt1P04104 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Krt1P04104 Gm29127-201ENSMUST00000188304 517 ntBASIC10.46□□□□□ -0.73
Krt1P04104 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.46□□□□□ -0.73
Krt1P04104 Gm42859-201ENSMUST00000199572 193 ntBASIC10.46□□□□□ -0.73
Krt1P04104 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.46□□□□□ -0.73
Krt1P04104 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.46□□□□□ -0.73
Krt1P04104 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.46□□□□□ -0.73
Krt1P04104 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.46□□□□□ -0.73
Krt1P04104 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms