Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Gm22662-201ENSMUST00000175290 256 ntBASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 BB187690-201ENSMUST00000198619 1176 ntBASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 AC102327.1-201ENSMUST00000226389 742 ntBASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Matn2-203ENSMUST00000226766 3252 ntBASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Gm42521-201ENSMUST00000199190 2040 ntBASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Gm6939-201ENSMUST00000122029 864 ntBASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Kif4-ps-202ENSMUST00000185083 652 ntBASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Gm8918-201ENSMUST00000190587 1087 ntBASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Gm5190-201ENSMUST00000192434 357 ntBASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 AC124356.1-201ENSMUST00000221469 698 ntBASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col4a6B1AVK5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Gm45663-201ENSMUST00000210429 1632 ntBASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Gm6276-201ENSMUST00000120159 579 ntBASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Gm24074-201ENSMUST00000158178 260 ntBASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Gm7539-201ENSMUST00000189789 630 ntBASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Gm6713-201ENSMUST00000216137 1446 ntBASIC11.26□□□□□ -0.61
Col4a6B1AVK5 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 AC127583.1-201ENSMUST00000224351 540 ntBASIC11.26□□□□□ -0.61
Col4a6B1AVK5 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col4a6B1AVK5 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms