Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Upk1bQ9Z2C6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Upk1bQ9Z2C6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 Gm14523-201ENSMUST00000117260 558 ntBASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upk1bQ9Z2C6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upk1bQ9Z2C6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Upk1bQ9Z2C6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Upk1bQ9Z2C6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upk1bQ9Z2C6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Upk1bQ9Z2C6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Upk1bQ9Z2C6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upk1bQ9Z2C6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upk1bQ9Z2C6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Upk1bQ9Z2C6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Upk1bQ9Z2C6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.74■□□□□ 0.59
Upk1bQ9Z2C6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Upk1bQ9Z2C6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upk1bQ9Z2C6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upk1bQ9Z2C6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Upk1bQ9Z2C6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.73■□□□□ 0.59
Upk1bQ9Z2C6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk1bQ9Z2C6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.73■□□□□ 0.59
Upk1bQ9Z2C6 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.73■□□□□ 0.59
Upk1bQ9Z2C6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk1bQ9Z2C6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk1bQ9Z2C6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk1bQ9Z2C6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upk1bQ9Z2C6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upk1bQ9Z2C6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.72■□□□□ 0.59
Upk1bQ9Z2C6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Upk1bQ9Z2C6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upk1bQ9Z2C6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upk1bQ9Z2C6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Upk1bQ9Z2C6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Upk1bQ9Z2C6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.71■□□□□ 0.59
Upk1bQ9Z2C6 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.71■□□□□ 0.59
Upk1bQ9Z2C6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Upk1bQ9Z2C6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Upk1bQ9Z2C6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1bQ9Z2C6 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.7■□□□□ 0.58
Upk1bQ9Z2C6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1bQ9Z2C6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1bQ9Z2C6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1bQ9Z2C6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1bQ9Z2C6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1bQ9Z2C6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1bQ9Z2C6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1bQ9Z2C6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1bQ9Z2C6 Gm7332-201ENSMUST00000118351 454 ntBASIC18.69■□□□□ 0.58
Upk1bQ9Z2C6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Upk1bQ9Z2C6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.69■□□□□ 0.58
Upk1bQ9Z2C6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1bQ9Z2C6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1bQ9Z2C6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1bQ9Z2C6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
Upk1bQ9Z2C6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1bQ9Z2C6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1bQ9Z2C6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1bQ9Z2C6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1bQ9Z2C6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1bQ9Z2C6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1bQ9Z2C6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1bQ9Z2C6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.68■□□□□ 0.58
Upk1bQ9Z2C6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1bQ9Z2C6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Upk1bQ9Z2C6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1bQ9Z2C6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1bQ9Z2C6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.67■□□□□ 0.58
Upk1bQ9Z2C6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1bQ9Z2C6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1bQ9Z2C6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1bQ9Z2C6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1bQ9Z2C6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1bQ9Z2C6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
Upk1bQ9Z2C6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1bQ9Z2C6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.66■□□□□ 0.58
Upk1bQ9Z2C6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1bQ9Z2C6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1bQ9Z2C6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Upk1bQ9Z2C6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1bQ9Z2C6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Upk1bQ9Z2C6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1bQ9Z2C6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1bQ9Z2C6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1bQ9Z2C6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1bQ9Z2C6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1bQ9Z2C6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.66■□□□□ 0.58
Upk1bQ9Z2C6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk1bQ9Z2C6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms