Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn3Q9Z0G9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cldn3Q9Z0G9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn3Q9Z0G9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cldn3Q9Z0G9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cldn3Q9Z0G9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cldn3Q9Z0G9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn3Q9Z0G9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cldn3Q9Z0G9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cldn3Q9Z0G9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.43■□□□□ 0.86
Cldn3Q9Z0G9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn3Q9Z0G9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn3Q9Z0G9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn3Q9Z0G9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn3Q9Z0G9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn3Q9Z0G9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn3Q9Z0G9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn3Q9Z0G9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn3Q9Z0G9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn3Q9Z0G9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.4■□□□□ 0.86
Cldn3Q9Z0G9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn3Q9Z0G9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.4■□□□□ 0.86
Cldn3Q9Z0G9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn3Q9Z0G9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cldn3Q9Z0G9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn3Q9Z0G9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cldn3Q9Z0G9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn3Q9Z0G9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Cldn3Q9Z0G9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn3Q9Z0G9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn3Q9Z0G9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn3Q9Z0G9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn3Q9Z0G9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn3Q9Z0G9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn3Q9Z0G9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn3Q9Z0G9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn3Q9Z0G9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn3Q9Z0G9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn3Q9Z0G9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn3Q9Z0G9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn3Q9Z0G9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.38■□□□□ 0.85
Cldn3Q9Z0G9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn3Q9Z0G9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn3Q9Z0G9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.38■□□□□ 0.85
Cldn3Q9Z0G9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn3Q9Z0G9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn3Q9Z0G9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn3Q9Z0G9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn3Q9Z0G9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn3Q9Z0G9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn3Q9Z0G9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn3Q9Z0G9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.37■□□□□ 0.85
Cldn3Q9Z0G9 Gm12922-201ENSMUST00000120626 809 ntBASIC20.37■□□□□ 0.85
Cldn3Q9Z0G9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.37■□□□□ 0.85
Cldn3Q9Z0G9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.37■□□□□ 0.85
Cldn3Q9Z0G9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn3Q9Z0G9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cldn3Q9Z0G9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn3Q9Z0G9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn3Q9Z0G9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn3Q9Z0G9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Cldn3Q9Z0G9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn3Q9Z0G9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn3Q9Z0G9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn3Q9Z0G9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn3Q9Z0G9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cldn3Q9Z0G9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn3Q9Z0G9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Gm43530-201ENSMUST00000195920 274 ntBASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.35■□□□□ 0.85
Cldn3Q9Z0G9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn3Q9Z0G9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn3Q9Z0G9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn3Q9Z0G9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Cldn3Q9Z0G9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms