Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn2Q9R0A1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Clcn2Q9R0A1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn2Q9R0A1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clcn2Q9R0A1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Clcn2Q9R0A1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn2Q9R0A1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn2Q9R0A1 Gm14117-201ENSMUST00000122417 843 ntBASIC20.64■□□□□ 0.89
Clcn2Q9R0A1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn2Q9R0A1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Clcn2Q9R0A1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn2Q9R0A1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn2Q9R0A1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn2Q9R0A1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn2Q9R0A1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn2Q9R0A1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn2Q9R0A1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn2Q9R0A1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn2Q9R0A1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn2Q9R0A1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Clcn2Q9R0A1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn2Q9R0A1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn2Q9R0A1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn2Q9R0A1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.62■□□□□ 0.89
Clcn2Q9R0A1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn2Q9R0A1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Clcn2Q9R0A1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Clcn2Q9R0A1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn2Q9R0A1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn2Q9R0A1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn2Q9R0A1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn2Q9R0A1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn2Q9R0A1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn2Q9R0A1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn2Q9R0A1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Clcn2Q9R0A1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Gm10399-202ENSMUST00000202768 748 ntBASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn2Q9R0A1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn2Q9R0A1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn2Q9R0A1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Clcn2Q9R0A1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.59■□□□□ 0.89
Clcn2Q9R0A1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.59■□□□□ 0.89
Clcn2Q9R0A1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Clcn2Q9R0A1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.59■□□□□ 0.89
Clcn2Q9R0A1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn2Q9R0A1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn2Q9R0A1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn2Q9R0A1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn2Q9R0A1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clcn2Q9R0A1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clcn2Q9R0A1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.58■□□□□ 0.89
Clcn2Q9R0A1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clcn2Q9R0A1 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.58■□□□□ 0.89
Clcn2Q9R0A1 Gm40881-201ENSMUST00000223397 166 ntBASIC20.58■□□□□ 0.89
Clcn2Q9R0A1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clcn2Q9R0A1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clcn2Q9R0A1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clcn2Q9R0A1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn2Q9R0A1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn2Q9R0A1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.57■□□□□ 0.88
Clcn2Q9R0A1 Etf1-202ENSMUST00000180351 108 ntBASIC20.57■□□□□ 0.88
Clcn2Q9R0A1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.57■□□□□ 0.88
Clcn2Q9R0A1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn2Q9R0A1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn2Q9R0A1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn2Q9R0A1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn2Q9R0A1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn2Q9R0A1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Clcn2Q9R0A1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.56■□□□□ 0.88
Clcn2Q9R0A1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn2Q9R0A1 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.56■□□□□ 0.88
Clcn2Q9R0A1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn2Q9R0A1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn2Q9R0A1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.56■□□□□ 0.88
Clcn2Q9R0A1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn2Q9R0A1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.56■□□□□ 0.88
Clcn2Q9R0A1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn2Q9R0A1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn2Q9R0A1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn2Q9R0A1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.55■□□□□ 0.88
Clcn2Q9R0A1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn2Q9R0A1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms