Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nif3l1Q9EQ80 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Nif3l1Q9EQ80 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.08■□□□□ 0.81
Nif3l1Q9EQ80 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nif3l1Q9EQ80 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nif3l1Q9EQ80 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Nif3l1Q9EQ80 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nif3l1Q9EQ80 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nif3l1Q9EQ80 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nif3l1Q9EQ80 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nif3l1Q9EQ80 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nif3l1Q9EQ80 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nif3l1Q9EQ80 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nif3l1Q9EQ80 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nif3l1Q9EQ80 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
Nif3l1Q9EQ80 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nif3l1Q9EQ80 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nif3l1Q9EQ80 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nif3l1Q9EQ80 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nif3l1Q9EQ80 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nif3l1Q9EQ80 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nif3l1Q9EQ80 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nif3l1Q9EQ80 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nif3l1Q9EQ80 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nif3l1Q9EQ80 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nif3l1Q9EQ80 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.06■□□□□ 0.8
Nif3l1Q9EQ80 Gm43530-201ENSMUST00000195920 274 ntBASIC20.06■□□□□ 0.8
Nif3l1Q9EQ80 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nif3l1Q9EQ80 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nif3l1Q9EQ80 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nif3l1Q9EQ80 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nif3l1Q9EQ80 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nif3l1Q9EQ80 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nif3l1Q9EQ80 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nif3l1Q9EQ80 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nif3l1Q9EQ80 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.03■□□□□ 0.8
Nif3l1Q9EQ80 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.03■□□□□ 0.8
Nif3l1Q9EQ80 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.03■□□□□ 0.8
Nif3l1Q9EQ80 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nif3l1Q9EQ80 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Nif3l1Q9EQ80 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nif3l1Q9EQ80 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.02■□□□□ 0.8
Nif3l1Q9EQ80 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nif3l1Q9EQ80 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nif3l1Q9EQ80 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Nif3l1Q9EQ80 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Nif3l1Q9EQ80 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nif3l1Q9EQ80 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nif3l1Q9EQ80 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nif3l1Q9EQ80 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nif3l1Q9EQ80 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nif3l1Q9EQ80 Gm12922-201ENSMUST00000120626 809 ntBASIC20.01■□□□□ 0.79
Nif3l1Q9EQ80 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.01■□□□□ 0.79
Nif3l1Q9EQ80 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nif3l1Q9EQ80 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nif3l1Q9EQ80 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nif3l1Q9EQ80 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nif3l1Q9EQ80 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Nif3l1Q9EQ80 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nif3l1Q9EQ80 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nif3l1Q9EQ80 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Nif3l1Q9EQ80 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Nif3l1Q9EQ80 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms