Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn3Q9DCB1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn3Q9DCB1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.97■□□□□ 0.63
Hmgn3Q9DCB1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn3Q9DCB1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Hmgn3Q9DCB1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn3Q9DCB1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Hmgn3Q9DCB1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgn3Q9DCB1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn3Q9DCB1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn3Q9DCB1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn3Q9DCB1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.95■□□□□ 0.62
Hmgn3Q9DCB1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.95■□□□□ 0.62
Hmgn3Q9DCB1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn3Q9DCB1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn3Q9DCB1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgn3Q9DCB1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.94■□□□□ 0.62
Hmgn3Q9DCB1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.94■□□□□ 0.62
Hmgn3Q9DCB1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn3Q9DCB1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.94■□□□□ 0.62
Hmgn3Q9DCB1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Hmgn3Q9DCB1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn3Q9DCB1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Hmgn3Q9DCB1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Hmgn3Q9DCB1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn3Q9DCB1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmgn3Q9DCB1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgn3Q9DCB1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgn3Q9DCB1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgn3Q9DCB1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.93■□□□□ 0.62
Hmgn3Q9DCB1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Hmgn3Q9DCB1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.93■□□□□ 0.62
Hmgn3Q9DCB1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgn3Q9DCB1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Hmgn3Q9DCB1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgn3Q9DCB1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn3Q9DCB1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn3Q9DCB1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn3Q9DCB1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn3Q9DCB1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.92■□□□□ 0.62
Hmgn3Q9DCB1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.92■□□□□ 0.62
Hmgn3Q9DCB1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn3Q9DCB1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn3Q9DCB1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Hmgn3Q9DCB1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn3Q9DCB1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn3Q9DCB1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn3Q9DCB1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn3Q9DCB1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn3Q9DCB1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmgn3Q9DCB1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmgn3Q9DCB1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn3Q9DCB1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn3Q9DCB1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn3Q9DCB1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn3Q9DCB1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn3Q9DCB1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.89■□□□□ 0.61
Hmgn3Q9DCB1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Hmgn3Q9DCB1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn3Q9DCB1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn3Q9DCB1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn3Q9DCB1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn3Q9DCB1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn3Q9DCB1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.88■□□□□ 0.61
Hmgn3Q9DCB1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn3Q9DCB1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.88■□□□□ 0.61
Hmgn3Q9DCB1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Hmgn3Q9DCB1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn3Q9DCB1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn3Q9DCB1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn3Q9DCB1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn3Q9DCB1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn3Q9DCB1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hmgn3Q9DCB1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn3Q9DCB1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms