Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ShpkQ9D5J6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShpkQ9D5J6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ShpkQ9D5J6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShpkQ9D5J6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.89■□□□□ 0.29
ShpkQ9D5J6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.89■□□□□ 0.29
ShpkQ9D5J6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShpkQ9D5J6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShpkQ9D5J6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShpkQ9D5J6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShpkQ9D5J6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ShpkQ9D5J6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.88■□□□□ 0.29
ShpkQ9D5J6 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.88■□□□□ 0.29
ShpkQ9D5J6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ShpkQ9D5J6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShpkQ9D5J6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShpkQ9D5J6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShpkQ9D5J6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShpkQ9D5J6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShpkQ9D5J6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShpkQ9D5J6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShpkQ9D5J6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.87■□□□□ 0.29
ShpkQ9D5J6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShpkQ9D5J6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ShpkQ9D5J6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShpkQ9D5J6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ShpkQ9D5J6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShpkQ9D5J6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShpkQ9D5J6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ShpkQ9D5J6 Golph3-205ENSMUST00000228671 2842 ntBASIC16.86■□□□□ 0.29
ShpkQ9D5J6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ShpkQ9D5J6 Gm45364-201ENSMUST00000210883 159 ntBASIC16.86■□□□□ 0.29
ShpkQ9D5J6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShpkQ9D5J6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.86■□□□□ 0.29
ShpkQ9D5J6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ShpkQ9D5J6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ShpkQ9D5J6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ShpkQ9D5J6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
ShpkQ9D5J6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.84■□□□□ 0.29
ShpkQ9D5J6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ShpkQ9D5J6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShpkQ9D5J6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.84■□□□□ 0.29
ShpkQ9D5J6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShpkQ9D5J6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
ShpkQ9D5J6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
ShpkQ9D5J6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShpkQ9D5J6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShpkQ9D5J6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.83■□□□□ 0.28
ShpkQ9D5J6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.83■□□□□ 0.28
ShpkQ9D5J6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ShpkQ9D5J6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ShpkQ9D5J6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShpkQ9D5J6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShpkQ9D5J6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShpkQ9D5J6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
ShpkQ9D5J6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ShpkQ9D5J6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.82■□□□□ 0.28
ShpkQ9D5J6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShpkQ9D5J6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.82■□□□□ 0.28
ShpkQ9D5J6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShpkQ9D5J6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
ShpkQ9D5J6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShpkQ9D5J6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShpkQ9D5J6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShpkQ9D5J6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShpkQ9D5J6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShpkQ9D5J6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShpkQ9D5J6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShpkQ9D5J6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShpkQ9D5J6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShpkQ9D5J6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ShpkQ9D5J6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShpkQ9D5J6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.8■□□□□ 0.28
ShpkQ9D5J6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShpkQ9D5J6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms