Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim42Q9D2H5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim42Q9D2H5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim42Q9D2H5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim42Q9D2H5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim42Q9D2H5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim42Q9D2H5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim42Q9D2H5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim42Q9D2H5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim42Q9D2H5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim42Q9D2H5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim42Q9D2H5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim42Q9D2H5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.08■□□□□ 0.8
Trim42Q9D2H5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim42Q9D2H5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim42Q9D2H5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Trim42Q9D2H5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim42Q9D2H5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim42Q9D2H5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim42Q9D2H5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.07■□□□□ 0.8
Trim42Q9D2H5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim42Q9D2H5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim42Q9D2H5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim42Q9D2H5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim42Q9D2H5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim42Q9D2H5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim42Q9D2H5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trim42Q9D2H5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim42Q9D2H5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim42Q9D2H5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim42Q9D2H5 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.06■□□□□ 0.8
Trim42Q9D2H5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.06■□□□□ 0.8
Trim42Q9D2H5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim42Q9D2H5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim42Q9D2H5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim42Q9D2H5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim42Q9D2H5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim42Q9D2H5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim42Q9D2H5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim42Q9D2H5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim42Q9D2H5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim42Q9D2H5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim42Q9D2H5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim42Q9D2H5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim42Q9D2H5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim42Q9D2H5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim42Q9D2H5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim42Q9D2H5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim42Q9D2H5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim42Q9D2H5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim42Q9D2H5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim42Q9D2H5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim42Q9D2H5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim42Q9D2H5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.03■□□□□ 0.8
Trim42Q9D2H5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim42Q9D2H5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim42Q9D2H5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim42Q9D2H5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim42Q9D2H5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim42Q9D2H5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim42Q9D2H5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim42Q9D2H5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Trim42Q9D2H5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.02■□□□□ 0.79
Trim42Q9D2H5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim42Q9D2H5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trim42Q9D2H5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim42Q9D2H5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim42Q9D2H5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim42Q9D2H5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim42Q9D2H5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim42Q9D2H5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Trim42Q9D2H5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim42Q9D2H5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim42Q9D2H5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim42Q9D2H5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim42Q9D2H5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim42Q9D2H5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trim42Q9D2H5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim42Q9D2H5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim42Q9D2H5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim42Q9D2H5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim42Q9D2H5 Gm37035-201ENSMUST00000194809 2148 ntBASIC20■□□□□ 0.79
Trim42Q9D2H5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim42Q9D2H5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim42Q9D2H5 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.99■□□□□ 0.79
Trim42Q9D2H5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim42Q9D2H5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim42Q9D2H5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms