Protein–RNA interactions for Protein: Q9D0F6

Rfc5, Replication factor C subunit 5, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc5Q9D0F6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rfc5Q9D0F6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc5Q9D0F6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.03■□□□□ 0.96
Rfc5Q9D0F6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc5Q9D0F6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.03■□□□□ 0.96
Rfc5Q9D0F6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc5Q9D0F6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc5Q9D0F6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc5Q9D0F6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfc5Q9D0F6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Rfc5Q9D0F6 Gm15039-201ENSMUST00000118914 875 ntBASIC21.02■□□□□ 0.96
Rfc5Q9D0F6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rfc5Q9D0F6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rfc5Q9D0F6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfc5Q9D0F6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfc5Q9D0F6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rfc5Q9D0F6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfc5Q9D0F6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
Rfc5Q9D0F6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
Rfc5Q9D0F6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rfc5Q9D0F6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfc5Q9D0F6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rfc5Q9D0F6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfc5Q9D0F6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfc5Q9D0F6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfc5Q9D0F6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21■□□□□ 0.95
Rfc5Q9D0F6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfc5Q9D0F6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Rfc5Q9D0F6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rfc5Q9D0F6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc5Q9D0F6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc5Q9D0F6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc5Q9D0F6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc5Q9D0F6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rfc5Q9D0F6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.99■□□□□ 0.95
Rfc5Q9D0F6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc5Q9D0F6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.99■□□□□ 0.95
Rfc5Q9D0F6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.99■□□□□ 0.95
Rfc5Q9D0F6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc5Q9D0F6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc5Q9D0F6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc5Q9D0F6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
Rfc5Q9D0F6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Rfc5Q9D0F6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc5Q9D0F6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc5Q9D0F6 Mir6236-201ENSMUST00000184437 123 ntBASIC20.98■□□□□ 0.95
Rfc5Q9D0F6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc5Q9D0F6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.98■□□□□ 0.95
Rfc5Q9D0F6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc5Q9D0F6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc5Q9D0F6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc5Q9D0F6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc5Q9D0F6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc5Q9D0F6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rfc5Q9D0F6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rfc5Q9D0F6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc5Q9D0F6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc5Q9D0F6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc5Q9D0F6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rfc5Q9D0F6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Rfc5Q9D0F6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc5Q9D0F6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Rfc5Q9D0F6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc5Q9D0F6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.95■□□□□ 0.94
Rfc5Q9D0F6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Rfc5Q9D0F6 Mir7075-201ENSMUST00000184187 82 ntBASIC20.95■□□□□ 0.94
Rfc5Q9D0F6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rfc5Q9D0F6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.95■□□□□ 0.94
Rfc5Q9D0F6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.95■□□□□ 0.94
Rfc5Q9D0F6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc5Q9D0F6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc5Q9D0F6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc5Q9D0F6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc5Q9D0F6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc5Q9D0F6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc5Q9D0F6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.93■□□□□ 0.94
Rfc5Q9D0F6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rfc5Q9D0F6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Rfc5Q9D0F6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rfc5Q9D0F6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc5Q9D0F6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc5Q9D0F6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc5Q9D0F6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc5Q9D0F6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc5Q9D0F6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc5Q9D0F6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc5Q9D0F6 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms