Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrps28Q9CY16 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.2■□□□□ 0.5
Mrps28Q9CY16 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.2■□□□□ 0.5
Mrps28Q9CY16 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Mrps28Q9CY16 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.2■□□□□ 0.5
Mrps28Q9CY16 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrps28Q9CY16 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.2■□□□□ 0.5
Mrps28Q9CY16 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrps28Q9CY16 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrps28Q9CY16 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mrps28Q9CY16 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrps28Q9CY16 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mrps28Q9CY16 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrps28Q9CY16 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.19■□□□□ 0.5
Mrps28Q9CY16 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Mrps28Q9CY16 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrps28Q9CY16 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrps28Q9CY16 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mrps28Q9CY16 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mrps28Q9CY16 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrps28Q9CY16 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.18■□□□□ 0.5
Mrps28Q9CY16 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.18■□□□□ 0.5
Mrps28Q9CY16 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrps28Q9CY16 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mrps28Q9CY16 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Mrps28Q9CY16 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrps28Q9CY16 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mrps28Q9CY16 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrps28Q9CY16 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrps28Q9CY16 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
Mrps28Q9CY16 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.17■□□□□ 0.5
Mrps28Q9CY16 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrps28Q9CY16 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mrps28Q9CY16 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrps28Q9CY16 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrps28Q9CY16 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrps28Q9CY16 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrps28Q9CY16 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrps28Q9CY16 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrps28Q9CY16 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrps28Q9CY16 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrps28Q9CY16 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mrps28Q9CY16 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mrps28Q9CY16 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrps28Q9CY16 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.14■□□□□ 0.5
Mrps28Q9CY16 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Mrps28Q9CY16 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Gm43530-201ENSMUST00000195920 274 ntBASIC18.14■□□□□ 0.49
Mrps28Q9CY16 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.14■□□□□ 0.49
Mrps28Q9CY16 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mrps28Q9CY16 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrps28Q9CY16 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrps28Q9CY16 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mrps28Q9CY16 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrps28Q9CY16 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mrps28Q9CY16 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrps28Q9CY16 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrps28Q9CY16 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mrps28Q9CY16 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrps28Q9CY16 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrps28Q9CY16 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrps28Q9CY16 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Mrps28Q9CY16 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.12■□□□□ 0.49
Mrps28Q9CY16 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.12■□□□□ 0.49
Mrps28Q9CY16 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.12■□□□□ 0.49
Mrps28Q9CY16 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Mrps28Q9CY16 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrps28Q9CY16 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrps28Q9CY16 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrps28Q9CY16 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrps28Q9CY16 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Mrps28Q9CY16 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Mrps28Q9CY16 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrps28Q9CY16 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Mrps28Q9CY16 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms