Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Rnaseh2aQ9CWY8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Rnaseh2aQ9CWY8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rnaseh2aQ9CWY8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rnaseh2aQ9CWY8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Rnaseh2aQ9CWY8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC24.61■■□□□ 1.53
Rnaseh2aQ9CWY8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC24.61■■□□□ 1.53
Rnaseh2aQ9CWY8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rnaseh2aQ9CWY8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rnaseh2aQ9CWY8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rnaseh2aQ9CWY8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Rnaseh2aQ9CWY8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Rnaseh2aQ9CWY8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC24.6■■□□□ 1.53
Rnaseh2aQ9CWY8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Rnaseh2aQ9CWY8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC24.6■■□□□ 1.53
Rnaseh2aQ9CWY8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Rnaseh2aQ9CWY8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC24.6■■□□□ 1.53
Rnaseh2aQ9CWY8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC24.6■■□□□ 1.53
Rnaseh2aQ9CWY8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rnaseh2aQ9CWY8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC24.6■■□□□ 1.53
Rnaseh2aQ9CWY8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Rnaseh2aQ9CWY8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnaseh2aQ9CWY8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnaseh2aQ9CWY8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnaseh2aQ9CWY8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC24.59■■□□□ 1.53
Rnaseh2aQ9CWY8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Rnaseh2aQ9CWY8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Rnaseh2aQ9CWY8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnaseh2aQ9CWY8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
Rnaseh2aQ9CWY8 Gm5408-201ENSMUST00000197998 747 ntBASIC24.58■■□□□ 1.53
Rnaseh2aQ9CWY8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rnaseh2aQ9CWY8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC24.58■■□□□ 1.52
Rnaseh2aQ9CWY8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Rnaseh2aQ9CWY8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rnaseh2aQ9CWY8 Gm13836-201ENSMUST00000121159 501 ntBASIC24.57■■□□□ 1.52
Rnaseh2aQ9CWY8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rnaseh2aQ9CWY8 AC135637.1-201ENSMUST00000227750 365 ntBASIC24.57■■□□□ 1.52
Rnaseh2aQ9CWY8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rnaseh2aQ9CWY8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rnaseh2aQ9CWY8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rnaseh2aQ9CWY8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC24.56■■□□□ 1.52
Rnaseh2aQ9CWY8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rnaseh2aQ9CWY8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rnaseh2aQ9CWY8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Rnaseh2aQ9CWY8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Rnaseh2aQ9CWY8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rnaseh2aQ9CWY8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Rnaseh2aQ9CWY8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rnaseh2aQ9CWY8 Gm29241-201ENSMUST00000189260 1096 ntBASIC24.55■■□□□ 1.52
Rnaseh2aQ9CWY8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC24.55■■□□□ 1.52
Rnaseh2aQ9CWY8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rnaseh2aQ9CWY8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rnaseh2aQ9CWY8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Rnaseh2aQ9CWY8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rnaseh2aQ9CWY8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rnaseh2aQ9CWY8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rnaseh2aQ9CWY8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Rnaseh2aQ9CWY8 Gm20049-201ENSMUST00000219950 730 ntBASIC24.54■■□□□ 1.52
Rnaseh2aQ9CWY8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Rnaseh2aQ9CWY8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rnaseh2aQ9CWY8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rnaseh2aQ9CWY8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnaseh2aQ9CWY8 Gm43859-201ENSMUST00000200075 1412 ntBASIC24.53■■□□□ 1.52
Rnaseh2aQ9CWY8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnaseh2aQ9CWY8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnaseh2aQ9CWY8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Rnaseh2aQ9CWY8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnaseh2aQ9CWY8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnaseh2aQ9CWY8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnaseh2aQ9CWY8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnaseh2aQ9CWY8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnaseh2aQ9CWY8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Rnaseh2aQ9CWY8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC24.52■■□□□ 1.52
Rnaseh2aQ9CWY8 Gm13181-201ENSMUST00000120117 1069 ntBASIC24.52■■□□□ 1.52
Rnaseh2aQ9CWY8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rnaseh2aQ9CWY8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnaseh2aQ9CWY8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rnaseh2aQ9CWY8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnaseh2aQ9CWY8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rnaseh2aQ9CWY8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rnaseh2aQ9CWY8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Rnaseh2aQ9CWY8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rnaseh2aQ9CWY8 Gm13148-201ENSMUST00000118892 745 ntBASIC24.5■■□□□ 1.51
Rnaseh2aQ9CWY8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rnaseh2aQ9CWY8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
Rnaseh2aQ9CWY8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC24.5■■□□□ 1.51
Rnaseh2aQ9CWY8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rnaseh2aQ9CWY8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Rnaseh2aQ9CWY8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Rnaseh2aQ9CWY8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Rnaseh2aQ9CWY8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Rnaseh2aQ9CWY8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rnaseh2aQ9CWY8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnaseh2aQ9CWY8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnaseh2aQ9CWY8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnaseh2aQ9CWY8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnaseh2aQ9CWY8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Rnaseh2aQ9CWY8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Rnaseh2aQ9CWY8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Rnaseh2aQ9CWY8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms