Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldnd1Q9CQX5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.94■□□□□ 0.94
Cldnd1Q9CQX5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.94■□□□□ 0.94
Cldnd1Q9CQX5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.94■□□□□ 0.94
Cldnd1Q9CQX5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.94■□□□□ 0.94
Cldnd1Q9CQX5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldnd1Q9CQX5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldnd1Q9CQX5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldnd1Q9CQX5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cldnd1Q9CQX5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldnd1Q9CQX5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldnd1Q9CQX5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldnd1Q9CQX5 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.93■□□□□ 0.94
Cldnd1Q9CQX5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldnd1Q9CQX5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldnd1Q9CQX5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.92■□□□□ 0.94
Cldnd1Q9CQX5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.92■□□□□ 0.94
Cldnd1Q9CQX5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldnd1Q9CQX5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldnd1Q9CQX5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cldnd1Q9CQX5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldnd1Q9CQX5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cldnd1Q9CQX5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.92■□□□□ 0.94
Cldnd1Q9CQX5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Cldnd1Q9CQX5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Cldnd1Q9CQX5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cldnd1Q9CQX5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cldnd1Q9CQX5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cldnd1Q9CQX5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldnd1Q9CQX5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cldnd1Q9CQX5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cldnd1Q9CQX5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cldnd1Q9CQX5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cldnd1Q9CQX5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Cldnd1Q9CQX5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cldnd1Q9CQX5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cldnd1Q9CQX5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldnd1Q9CQX5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cldnd1Q9CQX5 Nespas-201ENSMUST00000143738 1083 ntBASIC20.89■□□□□ 0.93
Cldnd1Q9CQX5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cldnd1Q9CQX5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Cldnd1Q9CQX5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldnd1Q9CQX5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldnd1Q9CQX5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldnd1Q9CQX5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldnd1Q9CQX5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldnd1Q9CQX5 Gm13234-201ENSMUST00000120010 747 ntBASIC20.88■□□□□ 0.93
Cldnd1Q9CQX5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cldnd1Q9CQX5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.88■□□□□ 0.93
Cldnd1Q9CQX5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldnd1Q9CQX5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldnd1Q9CQX5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.87■□□□□ 0.93
Cldnd1Q9CQX5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.87■□□□□ 0.93
Cldnd1Q9CQX5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.87■□□□□ 0.93
Cldnd1Q9CQX5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldnd1Q9CQX5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldnd1Q9CQX5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cldnd1Q9CQX5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Cldnd1Q9CQX5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldnd1Q9CQX5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.86■□□□□ 0.93
Cldnd1Q9CQX5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldnd1Q9CQX5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 Reep4-203ENSMUST00000226563 1444 ntBASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldnd1Q9CQX5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.84■□□□□ 0.93
Cldnd1Q9CQX5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldnd1Q9CQX5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cldnd1Q9CQX5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cldnd1Q9CQX5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cldnd1Q9CQX5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldnd1Q9CQX5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldnd1Q9CQX5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldnd1Q9CQX5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cldnd1Q9CQX5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Cldnd1Q9CQX5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms