Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.36■□□□□ 0.85
Retreg3Q9CQV4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retreg3Q9CQV4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Retreg3Q9CQV4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retreg3Q9CQV4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retreg3Q9CQV4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Retreg3Q9CQV4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.35■□□□□ 0.85
Retreg3Q9CQV4 Gm37444-201ENSMUST00000193605 439 ntBASIC20.35■□□□□ 0.85
Retreg3Q9CQV4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.35■□□□□ 0.85
Retreg3Q9CQV4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retreg3Q9CQV4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retreg3Q9CQV4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retreg3Q9CQV4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retreg3Q9CQV4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retreg3Q9CQV4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retreg3Q9CQV4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retreg3Q9CQV4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retreg3Q9CQV4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retreg3Q9CQV4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.34■□□□□ 0.85
Retreg3Q9CQV4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.34■□□□□ 0.85
Retreg3Q9CQV4 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.34■□□□□ 0.85
Retreg3Q9CQV4 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.34■□□□□ 0.85
Retreg3Q9CQV4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg3Q9CQV4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Retreg3Q9CQV4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retreg3Q9CQV4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Retreg3Q9CQV4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg3Q9CQV4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg3Q9CQV4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg3Q9CQV4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.32■□□□□ 0.84
Retreg3Q9CQV4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg3Q9CQV4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg3Q9CQV4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retreg3Q9CQV4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg3Q9CQV4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg3Q9CQV4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg3Q9CQV4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg3Q9CQV4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Retreg3Q9CQV4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg3Q9CQV4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg3Q9CQV4 Gm21956-201ENSMUST00000179946 522 ntBASIC20.31■□□□□ 0.84
Retreg3Q9CQV4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Retreg3Q9CQV4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg3Q9CQV4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg3Q9CQV4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg3Q9CQV4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg3Q9CQV4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg3Q9CQV4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg3Q9CQV4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.3■□□□□ 0.84
Retreg3Q9CQV4 Gm43530-201ENSMUST00000195920 274 ntBASIC20.3■□□□□ 0.84
Retreg3Q9CQV4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg3Q9CQV4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg3Q9CQV4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg3Q9CQV4 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.29■□□□□ 0.84
Retreg3Q9CQV4 Notumos-201ENSMUST00000151998 2659 ntBASIC20.29■□□□□ 0.84
Retreg3Q9CQV4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg3Q9CQV4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.29■□□□□ 0.84
Retreg3Q9CQV4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg3Q9CQV4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retreg3Q9CQV4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.29■□□□□ 0.84
Retreg3Q9CQV4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retreg3Q9CQV4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retreg3Q9CQV4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg3Q9CQV4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Retreg3Q9CQV4 Golgb1-201ENSMUST00000023534 498 ntBASIC20.28■□□□□ 0.84
Retreg3Q9CQV4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg3Q9CQV4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg3Q9CQV4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg3Q9CQV4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg3Q9CQV4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg3Q9CQV4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg3Q9CQV4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg3Q9CQV4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg3Q9CQV4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Retreg3Q9CQV4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg3Q9CQV4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg3Q9CQV4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg3Q9CQV4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg3Q9CQV4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg3Q9CQV4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg3Q9CQV4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg3Q9CQV4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retreg3Q9CQV4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retreg3Q9CQV4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg3Q9CQV4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg3Q9CQV4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg3Q9CQV4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Retreg3Q9CQV4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms