Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm5812-201ENSMUST00000061073 957 ntBASIC19.6■□□□□ 0.73
Rnf111Q99ML9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf111Q99ML9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf111Q99ML9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf111Q99ML9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf111Q99ML9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf111Q99ML9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf111Q99ML9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf111Q99ML9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.59■□□□□ 0.73
Rnf111Q99ML9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.59■□□□□ 0.73
Rnf111Q99ML9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rnf111Q99ML9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Rnf111Q99ML9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf111Q99ML9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf111Q99ML9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf111Q99ML9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf111Q99ML9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf111Q99ML9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.58■□□□□ 0.72
Rnf111Q99ML9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf111Q99ML9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.58■□□□□ 0.72
Rnf111Q99ML9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.58■□□□□ 0.72
Rnf111Q99ML9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf111Q99ML9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf111Q99ML9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf111Q99ML9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf111Q99ML9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf111Q99ML9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf111Q99ML9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.57■□□□□ 0.72
Rnf111Q99ML9 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.57■□□□□ 0.72
Rnf111Q99ML9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.57■□□□□ 0.72
Rnf111Q99ML9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf111Q99ML9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rnf111Q99ML9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rnf111Q99ML9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf111Q99ML9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf111Q99ML9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf111Q99ML9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf111Q99ML9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rnf111Q99ML9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf111Q99ML9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf111Q99ML9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf111Q99ML9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.56■□□□□ 0.72
Rnf111Q99ML9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf111Q99ML9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf111Q99ML9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf111Q99ML9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.56■□□□□ 0.72
Rnf111Q99ML9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf111Q99ML9 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.55■□□□□ 0.72
Rnf111Q99ML9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf111Q99ML9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf111Q99ML9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf111Q99ML9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf111Q99ML9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.55■□□□□ 0.72
Rnf111Q99ML9 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.55■□□□□ 0.72
Rnf111Q99ML9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.55■□□□□ 0.72
Rnf111Q99ML9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Rnf111Q99ML9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf111Q99ML9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf111Q99ML9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.55■□□□□ 0.72
Rnf111Q99ML9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Rnf111Q99ML9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf111Q99ML9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf111Q99ML9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf111Q99ML9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf111Q99ML9 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.54■□□□□ 0.72
Rnf111Q99ML9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf111Q99ML9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rnf111Q99ML9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
Rnf111Q99ML9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Rnf111Q99ML9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf111Q99ML9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf111Q99ML9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf111Q99ML9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rnf111Q99ML9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.53■□□□□ 0.72
Rnf111Q99ML9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Rnf111Q99ML9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rnf111Q99ML9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf111Q99ML9 Gm15546-201ENSMUST00000122095 826 ntBASIC19.53■□□□□ 0.72
Rnf111Q99ML9 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.53■□□□□ 0.72
Rnf111Q99ML9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf111Q99ML9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf111Q99ML9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf111Q99ML9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf111Q99ML9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf111Q99ML9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.52■□□□□ 0.72
Rnf111Q99ML9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rnf111Q99ML9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.52■□□□□ 0.72
Rnf111Q99ML9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.52■□□□□ 0.72
Rnf111Q99ML9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf111Q99ML9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf111Q99ML9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.51■□□□□ 0.71
Rnf111Q99ML9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf111Q99ML9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf111Q99ML9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.51■□□□□ 0.71
Rnf111Q99ML9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf111Q99ML9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.51■□□□□ 0.71
Rnf111Q99ML9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf111Q99ML9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf111Q99ML9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf111Q99ML9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms