Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cstf1Q99LC2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.23■□□□□ 0.83
Cstf1Q99LC2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cstf1Q99LC2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Cstf1Q99LC2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cstf1Q99LC2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cstf1Q99LC2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.22■□□□□ 0.83
Cstf1Q99LC2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.22■□□□□ 0.83
Cstf1Q99LC2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cstf1Q99LC2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cstf1Q99LC2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Cstf1Q99LC2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cstf1Q99LC2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cstf1Q99LC2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cstf1Q99LC2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.21■□□□□ 0.83
Cstf1Q99LC2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cstf1Q99LC2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Cstf1Q99LC2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cstf1Q99LC2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cstf1Q99LC2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cstf1Q99LC2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.2■□□□□ 0.82
Cstf1Q99LC2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.2■□□□□ 0.82
Cstf1Q99LC2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf1Q99LC2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cstf1Q99LC2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cstf1Q99LC2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Cstf1Q99LC2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf1Q99LC2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf1Q99LC2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cstf1Q99LC2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf1Q99LC2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf1Q99LC2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.19■□□□□ 0.82
Cstf1Q99LC2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cstf1Q99LC2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cstf1Q99LC2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cstf1Q99LC2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cstf1Q99LC2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cstf1Q99LC2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cstf1Q99LC2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cstf1Q99LC2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cstf1Q99LC2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cstf1Q99LC2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cstf1Q99LC2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cstf1Q99LC2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cstf1Q99LC2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cstf1Q99LC2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.17■□□□□ 0.82
Cstf1Q99LC2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.17■□□□□ 0.82
Cstf1Q99LC2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cstf1Q99LC2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cstf1Q99LC2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cstf1Q99LC2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cstf1Q99LC2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cstf1Q99LC2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cstf1Q99LC2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cstf1Q99LC2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cstf1Q99LC2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.15■□□□□ 0.82
Cstf1Q99LC2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cstf1Q99LC2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cstf1Q99LC2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cstf1Q99LC2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.15■□□□□ 0.82
Cstf1Q99LC2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cstf1Q99LC2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cstf1Q99LC2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.14■□□□□ 0.81
Cstf1Q99LC2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cstf1Q99LC2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cstf1Q99LC2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cstf1Q99LC2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cstf1Q99LC2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cstf1Q99LC2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cstf1Q99LC2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.12■□□□□ 0.81
Cstf1Q99LC2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Cstf1Q99LC2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cstf1Q99LC2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cstf1Q99LC2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cstf1Q99LC2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cstf1Q99LC2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms