Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Chmp1aQ921W0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp1aQ921W0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp1aQ921W0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.78■□□□□ 0.44
Chmp1aQ921W0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp1aQ921W0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp1aQ921W0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp1aQ921W0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp1aQ921W0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp1aQ921W0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp1aQ921W0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp1aQ921W0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.77■□□□□ 0.44
Chmp1aQ921W0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp1aQ921W0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp1aQ921W0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp1aQ921W0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Chmp1aQ921W0 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.77■□□□□ 0.44
Chmp1aQ921W0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp1aQ921W0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp1aQ921W0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp1aQ921W0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Chmp1aQ921W0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp1aQ921W0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chmp1aQ921W0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.76■□□□□ 0.43
Chmp1aQ921W0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.76■□□□□ 0.43
Chmp1aQ921W0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp1aQ921W0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp1aQ921W0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp1aQ921W0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp1aQ921W0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp1aQ921W0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp1aQ921W0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp1aQ921W0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Chmp1aQ921W0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp1aQ921W0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp1aQ921W0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.75■□□□□ 0.43
Chmp1aQ921W0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp1aQ921W0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp1aQ921W0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp1aQ921W0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chmp1aQ921W0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chmp1aQ921W0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp1aQ921W0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp1aQ921W0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp1aQ921W0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp1aQ921W0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp1aQ921W0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chmp1aQ921W0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Chmp1aQ921W0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp1aQ921W0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp1aQ921W0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp1aQ921W0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp1aQ921W0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp1aQ921W0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.74■□□□□ 0.43
Chmp1aQ921W0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp1aQ921W0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp1aQ921W0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp1aQ921W0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp1aQ921W0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp1aQ921W0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp1aQ921W0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.73■□□□□ 0.43
Chmp1aQ921W0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp1aQ921W0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp1aQ921W0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp1aQ921W0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp1aQ921W0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp1aQ921W0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp1aQ921W0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chmp1aQ921W0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp1aQ921W0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Chmp1aQ921W0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Chmp1aQ921W0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp1aQ921W0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp1aQ921W0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.71■□□□□ 0.43
Chmp1aQ921W0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp1aQ921W0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp1aQ921W0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp1aQ921W0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp1aQ921W0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp1aQ921W0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp1aQ921W0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp1aQ921W0 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.71■□□□□ 0.42
Chmp1aQ921W0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.71■□□□□ 0.42
Chmp1aQ921W0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Chmp1aQ921W0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Chmp1aQ921W0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp1aQ921W0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp1aQ921W0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms