Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.39■□□□□ 0.69
Pcdhb20Q91XZ9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb20Q91XZ9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhb20Q91XZ9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb20Q91XZ9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb20Q91XZ9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb20Q91XZ9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb20Q91XZ9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb20Q91XZ9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb20Q91XZ9 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcdhb20Q91XZ9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb20Q91XZ9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcdhb20Q91XZ9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb20Q91XZ9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb20Q91XZ9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb20Q91XZ9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhb20Q91XZ9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhb20Q91XZ9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Trmt13-210ENSMUST00000198454 880 ntBASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb20Q91XZ9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb20Q91XZ9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb20Q91XZ9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb20Q91XZ9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb20Q91XZ9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.34■□□□□ 0.69
Pcdhb20Q91XZ9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.34■□□□□ 0.69
Pcdhb20Q91XZ9 AC153937.1-201ENSMUST00000218734 412 ntBASIC19.34■□□□□ 0.69
Pcdhb20Q91XZ9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb20Q91XZ9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb20Q91XZ9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb20Q91XZ9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb20Q91XZ9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb20Q91XZ9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pcdhb20Q91XZ9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
Pcdhb20Q91XZ9 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.33■□□□□ 0.68
Pcdhb20Q91XZ9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
Pcdhb20Q91XZ9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhb20Q91XZ9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb20Q91XZ9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdhb20Q91XZ9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb20Q91XZ9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb20Q91XZ9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb20Q91XZ9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.32■□□□□ 0.68
Pcdhb20Q91XZ9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb20Q91XZ9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb20Q91XZ9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb20Q91XZ9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb20Q91XZ9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb20Q91XZ9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.32■□□□□ 0.68
Pcdhb20Q91XZ9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms