Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
Pcdhga4Q91XY4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdhga4Q91XY4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhga4Q91XY4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Pcdhga4Q91XY4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdhga4Q91XY4 Golgb1-201ENSMUST00000023534 498 ntBASIC19.77■□□□□ 0.76
Pcdhga4Q91XY4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga4Q91XY4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhga4Q91XY4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.77■□□□□ 0.75
Pcdhga4Q91XY4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga4Q91XY4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga4Q91XY4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhga4Q91XY4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhga4Q91XY4 Gm7143-201ENSMUST00000222811 859 ntBASIC19.76■□□□□ 0.75
Pcdhga4Q91XY4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga4Q91XY4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga4Q91XY4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga4Q91XY4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhga4Q91XY4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga4Q91XY4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.75■□□□□ 0.75
Pcdhga4Q91XY4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga4Q91XY4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdhga4Q91XY4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Pcdhga4Q91XY4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga4Q91XY4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga4Q91XY4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga4Q91XY4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga4Q91XY4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdhga4Q91XY4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhga4Q91XY4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga4Q91XY4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga4Q91XY4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga4Q91XY4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga4Q91XY4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga4Q91XY4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Pcdhga4Q91XY4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga4Q91XY4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdhga4Q91XY4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga4Q91XY4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdhga4Q91XY4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdhga4Q91XY4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga4Q91XY4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga4Q91XY4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga4Q91XY4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga4Q91XY4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga4Q91XY4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.72■□□□□ 0.75
Pcdhga4Q91XY4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhga4Q91XY4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga4Q91XY4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga4Q91XY4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga4Q91XY4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga4Q91XY4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga4Q91XY4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhga4Q91XY4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga4Q91XY4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga4Q91XY4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga4Q91XY4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga4Q91XY4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga4Q91XY4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhga4Q91XY4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga4Q91XY4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga4Q91XY4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.7■□□□□ 0.74
Pcdhga4Q91XY4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga4Q91XY4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdhga4Q91XY4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga4Q91XY4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga4Q91XY4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga4Q91XY4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga4Q91XY4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga4Q91XY4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga4Q91XY4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdhga4Q91XY4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga4Q91XY4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga4Q91XY4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga4Q91XY4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pcdhga4Q91XY4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms