Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3kbp1Q8R550 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3kbp1Q8R550 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3kbp1Q8R550 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Sh3kbp1Q8R550 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3kbp1Q8R550 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3kbp1Q8R550 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.8■□□□□ 0.92
Sh3kbp1Q8R550 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Sh3kbp1Q8R550 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Sh3kbp1Q8R550 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3kbp1Q8R550 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3kbp1Q8R550 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.8■□□□□ 0.92
Sh3kbp1Q8R550 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Sh3kbp1Q8R550 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3kbp1Q8R550 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3kbp1Q8R550 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3kbp1Q8R550 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
Sh3kbp1Q8R550 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3kbp1Q8R550 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.79■□□□□ 0.92
Sh3kbp1Q8R550 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Sh3kbp1Q8R550 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.79■□□□□ 0.92
Sh3kbp1Q8R550 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3kbp1Q8R550 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3kbp1Q8R550 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Sh3kbp1Q8R550 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3kbp1Q8R550 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sh3kbp1Q8R550 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3kbp1Q8R550 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.78■□□□□ 0.92
Sh3kbp1Q8R550 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3kbp1Q8R550 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3kbp1Q8R550 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3kbp1Q8R550 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3kbp1Q8R550 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Sh3kbp1Q8R550 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3kbp1Q8R550 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3kbp1Q8R550 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3kbp1Q8R550 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.77■□□□□ 0.91
Sh3kbp1Q8R550 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sh3kbp1Q8R550 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3kbp1Q8R550 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3kbp1Q8R550 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.76■□□□□ 0.91
Sh3kbp1Q8R550 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.76■□□□□ 0.91
Sh3kbp1Q8R550 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3kbp1Q8R550 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Sh3kbp1Q8R550 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3kbp1Q8R550 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3kbp1Q8R550 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3kbp1Q8R550 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3kbp1Q8R550 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3kbp1Q8R550 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.75■□□□□ 0.91
Sh3kbp1Q8R550 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Sh3kbp1Q8R550 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3kbp1Q8R550 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3kbp1Q8R550 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Sh3kbp1Q8R550 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3kbp1Q8R550 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sh3kbp1Q8R550 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3kbp1Q8R550 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3kbp1Q8R550 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Sh3kbp1Q8R550 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3kbp1Q8R550 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.73■□□□□ 0.91
Sh3kbp1Q8R550 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Sh3kbp1Q8R550 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3kbp1Q8R550 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.73■□□□□ 0.91
Sh3kbp1Q8R550 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.73■□□□□ 0.91
Sh3kbp1Q8R550 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.73■□□□□ 0.91
Sh3kbp1Q8R550 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3kbp1Q8R550 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.73■□□□□ 0.91
Sh3kbp1Q8R550 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3kbp1Q8R550 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3kbp1Q8R550 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3kbp1Q8R550 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3kbp1Q8R550 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
Sh3kbp1Q8R550 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3kbp1Q8R550 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3kbp1Q8R550 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3kbp1Q8R550 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3kbp1Q8R550 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3kbp1Q8R550 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3kbp1Q8R550 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3kbp1Q8R550 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3kbp1Q8R550 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3kbp1Q8R550 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Sh3kbp1Q8R550 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3kbp1Q8R550 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3kbp1Q8R550 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3kbp1Q8R550 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Sh3kbp1Q8R550 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3kbp1Q8R550 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Sh3kbp1Q8R550 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3kbp1Q8R550 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Sh3kbp1Q8R550 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3kbp1Q8R550 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3kbp1Q8R550 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3kbp1Q8R550 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Sh3kbp1Q8R550 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3kbp1Q8R550 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sh3kbp1Q8R550 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
Sh3kbp1Q8R550 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3kbp1Q8R550 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms