Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Chmp7Q8R1T1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Chmp7Q8R1T1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
Chmp7Q8R1T1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Chmp7Q8R1T1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Chmp7Q8R1T1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Chmp7Q8R1T1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Chmp7Q8R1T1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
Chmp7Q8R1T1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Chmp7Q8R1T1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Chmp7Q8R1T1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Chmp7Q8R1T1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Chmp7Q8R1T1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Chmp7Q8R1T1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC26.05■■□□□ 1.76
Chmp7Q8R1T1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Chmp7Q8R1T1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Chmp7Q8R1T1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Chmp7Q8R1T1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Chmp7Q8R1T1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Chmp7Q8R1T1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Chmp7Q8R1T1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Chmp7Q8R1T1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Chmp7Q8R1T1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Chmp7Q8R1T1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
Chmp7Q8R1T1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Chmp7Q8R1T1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC26.04■■□□□ 1.76
Chmp7Q8R1T1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Chmp7Q8R1T1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC26.04■■□□□ 1.76
Chmp7Q8R1T1 Gm7291-201ENSMUST00000199147 382 ntBASIC26.04■■□□□ 1.76
Chmp7Q8R1T1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC26.04■■□□□ 1.76
Chmp7Q8R1T1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Chmp7Q8R1T1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Chmp7Q8R1T1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Chmp7Q8R1T1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Chmp7Q8R1T1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC26.03■■□□□ 1.76
Chmp7Q8R1T1 Gm26571-201ENSMUST00000181399 666 ntBASIC26.03■■□□□ 1.76
Chmp7Q8R1T1 Gm42569-201ENSMUST00000200539 472 ntBASIC26.03■■□□□ 1.76
Chmp7Q8R1T1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC26.03■■□□□ 1.76
Chmp7Q8R1T1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Chmp7Q8R1T1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Chmp7Q8R1T1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Chmp7Q8R1T1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Chmp7Q8R1T1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Chmp7Q8R1T1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Chmp7Q8R1T1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Chmp7Q8R1T1 Gm42642-201ENSMUST00000200683 355 ntBASIC26.02■■□□□ 1.76
Chmp7Q8R1T1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC26.02■■□□□ 1.76
Chmp7Q8R1T1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Chmp7Q8R1T1 Gm10129-202ENSMUST00000193100 1316 ntBASIC26.02■■□□□ 1.76
Chmp7Q8R1T1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Chmp7Q8R1T1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Chmp7Q8R1T1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Chmp7Q8R1T1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Chmp7Q8R1T1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Chmp7Q8R1T1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Chmp7Q8R1T1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Chmp7Q8R1T1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
Chmp7Q8R1T1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC26■■□□□ 1.75
Chmp7Q8R1T1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC26■■□□□ 1.75
Chmp7Q8R1T1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Chmp7Q8R1T1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26■■□□□ 1.75
Chmp7Q8R1T1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Chmp7Q8R1T1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Chmp7Q8R1T1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Chmp7Q8R1T1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Chmp7Q8R1T1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Chmp7Q8R1T1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Chmp7Q8R1T1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Chmp7Q8R1T1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Chmp7Q8R1T1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Chmp7Q8R1T1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chmp7Q8R1T1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chmp7Q8R1T1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chmp7Q8R1T1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chmp7Q8R1T1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chmp7Q8R1T1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chmp7Q8R1T1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chmp7Q8R1T1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Chmp7Q8R1T1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Chmp7Q8R1T1 Gm27405-201ENSMUST00000184201 112 ntBASIC25.96■■□□□ 1.75
Chmp7Q8R1T1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC25.96■■□□□ 1.75
Chmp7Q8R1T1 Gm11421-201ENSMUST00000122124 294 ntBASIC25.95■■□□□ 1.74
Chmp7Q8R1T1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC25.95■■□□□ 1.74
Chmp7Q8R1T1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Chmp7Q8R1T1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Chmp7Q8R1T1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Chmp7Q8R1T1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Chmp7Q8R1T1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Chmp7Q8R1T1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Chmp7Q8R1T1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Chmp7Q8R1T1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Chmp7Q8R1T1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Chmp7Q8R1T1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Chmp7Q8R1T1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Chmp7Q8R1T1 Gm10849-201ENSMUST00000100397 618 ntBASIC25.93■■□□□ 1.74
Chmp7Q8R1T1 Mir6236-201ENSMUST00000184437 123 ntBASIC25.93■■□□□ 1.74
Chmp7Q8R1T1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Chmp7Q8R1T1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Chmp7Q8R1T1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.93■■□□□ 1.74
Chmp7Q8R1T1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms