Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rpp40Q8R1F9 Gm43137-201ENSMUST00000198052 594 ntBASIC21.76■■□□□ 1.07
Rpp40Q8R1F9 Gm45417-201ENSMUST00000209533 758 ntBASIC21.76■■□□□ 1.07
Rpp40Q8R1F9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.76■■□□□ 1.07
Rpp40Q8R1F9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpp40Q8R1F9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpp40Q8R1F9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.75■■□□□ 1.07
Rpp40Q8R1F9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpp40Q8R1F9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpp40Q8R1F9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpp40Q8R1F9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.75■■□□□ 1.07
Rpp40Q8R1F9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.75■■□□□ 1.07
Rpp40Q8R1F9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rpp40Q8R1F9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpp40Q8R1F9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpp40Q8R1F9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpp40Q8R1F9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpp40Q8R1F9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Rpp40Q8R1F9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.74■■□□□ 1.07
Rpp40Q8R1F9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpp40Q8R1F9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Rpp40Q8R1F9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rpp40Q8R1F9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpp40Q8R1F9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpp40Q8R1F9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rpp40Q8R1F9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rpp40Q8R1F9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rpp40Q8R1F9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rpp40Q8R1F9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rpp40Q8R1F9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rpp40Q8R1F9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rpp40Q8R1F9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rpp40Q8R1F9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rpp40Q8R1F9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpp40Q8R1F9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rpp40Q8R1F9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Rpp40Q8R1F9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.72■■□□□ 1.07
Rpp40Q8R1F9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpp40Q8R1F9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpp40Q8R1F9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpp40Q8R1F9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rpp40Q8R1F9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpp40Q8R1F9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpp40Q8R1F9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpp40Q8R1F9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpp40Q8R1F9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rpp40Q8R1F9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.71■■□□□ 1.07
Rpp40Q8R1F9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpp40Q8R1F9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpp40Q8R1F9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Rpp40Q8R1F9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
Rpp40Q8R1F9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpp40Q8R1F9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.7■■□□□ 1.06
Rpp40Q8R1F9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.7■■□□□ 1.06
Rpp40Q8R1F9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rpp40Q8R1F9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpp40Q8R1F9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rpp40Q8R1F9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.7■■□□□ 1.06
Rpp40Q8R1F9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rpp40Q8R1F9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rpp40Q8R1F9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpp40Q8R1F9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Rpp40Q8R1F9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rpp40Q8R1F9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpp40Q8R1F9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rpp40Q8R1F9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpp40Q8R1F9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpp40Q8R1F9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rpp40Q8R1F9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Rpp40Q8R1F9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpp40Q8R1F9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpp40Q8R1F9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rpp40Q8R1F9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rpp40Q8R1F9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpp40Q8R1F9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.67■■□□□ 1.06
Rpp40Q8R1F9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
Rpp40Q8R1F9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpp40Q8R1F9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpp40Q8R1F9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpp40Q8R1F9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpp40Q8R1F9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Rpp40Q8R1F9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpp40Q8R1F9 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.66■■□□□ 1.06
Rpp40Q8R1F9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rpp40Q8R1F9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rpp40Q8R1F9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpp40Q8R1F9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rpp40Q8R1F9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpp40Q8R1F9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Rpp40Q8R1F9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpp40Q8R1F9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpp40Q8R1F9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rpp40Q8R1F9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.65■■□□□ 1.06
Rpp40Q8R1F9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.65■■□□□ 1.06
Rpp40Q8R1F9 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.65■■□□□ 1.06
Rpp40Q8R1F9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rpp40Q8R1F9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpp40Q8R1F9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpp40Q8R1F9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpp40Q8R1F9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms