Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clrn1Q8K445 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clrn1Q8K445 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Clrn1Q8K445 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clrn1Q8K445 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Clrn1Q8K445 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clrn1Q8K445 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.05■□□□□ 0.64
Clrn1Q8K445 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clrn1Q8K445 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.04■□□□□ 0.64
Clrn1Q8K445 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn1Q8K445 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn1Q8K445 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.04■□□□□ 0.64
Clrn1Q8K445 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.04■□□□□ 0.64
Clrn1Q8K445 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Clrn1Q8K445 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Clrn1Q8K445 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn1Q8K445 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn1Q8K445 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn1Q8K445 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn1Q8K445 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn1Q8K445 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn1Q8K445 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
Clrn1Q8K445 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.03■□□□□ 0.64
Clrn1Q8K445 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn1Q8K445 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn1Q8K445 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Clrn1Q8K445 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Clrn1Q8K445 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn1Q8K445 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.02■□□□□ 0.64
Clrn1Q8K445 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clrn1Q8K445 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
Clrn1Q8K445 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.02■□□□□ 0.64
Clrn1Q8K445 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clrn1Q8K445 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn1Q8K445 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn1Q8K445 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn1Q8K445 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn1Q8K445 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn1Q8K445 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn1Q8K445 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
Clrn1Q8K445 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19■□□□□ 0.63
Clrn1Q8K445 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19■□□□□ 0.63
Clrn1Q8K445 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clrn1Q8K445 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn1Q8K445 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn1Q8K445 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19■□□□□ 0.63
Clrn1Q8K445 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn1Q8K445 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn1Q8K445 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn1Q8K445 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn1Q8K445 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.99■□□□□ 0.63
Clrn1Q8K445 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.99■□□□□ 0.63
Clrn1Q8K445 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn1Q8K445 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn1Q8K445 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn1Q8K445 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn1Q8K445 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clrn1Q8K445 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clrn1Q8K445 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clrn1Q8K445 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clrn1Q8K445 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clrn1Q8K445 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Clrn1Q8K445 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clrn1Q8K445 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.98■□□□□ 0.63
Clrn1Q8K445 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clrn1Q8K445 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn1Q8K445 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn1Q8K445 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn1Q8K445 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Clrn1Q8K445 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.97■□□□□ 0.63
Clrn1Q8K445 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn1Q8K445 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn1Q8K445 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Clrn1Q8K445 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn1Q8K445 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Clrn1Q8K445 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn1Q8K445 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Clrn1Q8K445 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.97■□□□□ 0.63
Clrn1Q8K445 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clrn1Q8K445 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Clrn1Q8K445 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clrn1Q8K445 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clrn1Q8K445 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clrn1Q8K445 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.96■□□□□ 0.63
Clrn1Q8K445 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Clrn1Q8K445 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms