Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scara5Q8K299 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Scara5Q8K299 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.29■□□□□ 0.84
Scara5Q8K299 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scara5Q8K299 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scara5Q8K299 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.29■□□□□ 0.84
Scara5Q8K299 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scara5Q8K299 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scara5Q8K299 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scara5Q8K299 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Scara5Q8K299 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scara5Q8K299 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scara5Q8K299 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scara5Q8K299 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scara5Q8K299 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Scara5Q8K299 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scara5Q8K299 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Scara5Q8K299 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scara5Q8K299 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scara5Q8K299 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scara5Q8K299 Smad6-203ENSMUST00000179458 273 ntBASIC20.27■□□□□ 0.84
Scara5Q8K299 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Scara5Q8K299 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scara5Q8K299 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scara5Q8K299 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scara5Q8K299 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scara5Q8K299 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scara5Q8K299 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Scara5Q8K299 Gm18671-201ENSMUST00000214826 683 ntBASIC20.26■□□□□ 0.83
Scara5Q8K299 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scara5Q8K299 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scara5Q8K299 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scara5Q8K299 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scara5Q8K299 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.25■□□□□ 0.83
Scara5Q8K299 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scara5Q8K299 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.25■□□□□ 0.83
Scara5Q8K299 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scara5Q8K299 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Scara5Q8K299 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scara5Q8K299 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Scara5Q8K299 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.24■□□□□ 0.83
Scara5Q8K299 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scara5Q8K299 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Scara5Q8K299 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scara5Q8K299 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scara5Q8K299 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scara5Q8K299 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scara5Q8K299 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.23■□□□□ 0.83
Scara5Q8K299 AV356131-201ENSMUST00000206201 750 ntBASIC20.23■□□□□ 0.83
Scara5Q8K299 Gm10033-202ENSMUST00000211874 928 ntBASIC20.23■□□□□ 0.83
Scara5Q8K299 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.23■□□□□ 0.83
Scara5Q8K299 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scara5Q8K299 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scara5Q8K299 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scara5Q8K299 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scara5Q8K299 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scara5Q8K299 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Scara5Q8K299 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scara5Q8K299 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scara5Q8K299 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scara5Q8K299 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Scara5Q8K299 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.22■□□□□ 0.83
Scara5Q8K299 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.22■□□□□ 0.83
Scara5Q8K299 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.22■□□□□ 0.83
Scara5Q8K299 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.21■□□□□ 0.83
Scara5Q8K299 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.21■□□□□ 0.83
Scara5Q8K299 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Scara5Q8K299 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.21■□□□□ 0.83
Scara5Q8K299 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scara5Q8K299 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scara5Q8K299 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.2■□□□□ 0.82
Scara5Q8K299 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scara5Q8K299 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scara5Q8K299 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scara5Q8K299 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.2■□□□□ 0.82
Scara5Q8K299 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.2■□□□□ 0.82
Scara5Q8K299 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Scara5Q8K299 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Scara5Q8K299 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.19■□□□□ 0.82
Scara5Q8K299 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.19■□□□□ 0.82
Scara5Q8K299 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scara5Q8K299 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Scara5Q8K299 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scara5Q8K299 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scara5Q8K299 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Scara5Q8K299 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
Scara5Q8K299 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scara5Q8K299 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms