Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rfwd3Q8CIK8 Gm12922-201ENSMUST00000120626 809 ntBASIC18.95■□□□□ 0.62
Rfwd3Q8CIK8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfwd3Q8CIK8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfwd3Q8CIK8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfwd3Q8CIK8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfwd3Q8CIK8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfwd3Q8CIK8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfwd3Q8CIK8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.94■□□□□ 0.62
Rfwd3Q8CIK8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfwd3Q8CIK8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Rfwd3Q8CIK8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfwd3Q8CIK8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfwd3Q8CIK8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfwd3Q8CIK8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfwd3Q8CIK8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.93■□□□□ 0.62
Rfwd3Q8CIK8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rfwd3Q8CIK8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rfwd3Q8CIK8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.92■□□□□ 0.62
Rfwd3Q8CIK8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfwd3Q8CIK8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfwd3Q8CIK8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd3Q8CIK8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd3Q8CIK8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd3Q8CIK8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd3Q8CIK8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.91■□□□□ 0.62
Rfwd3Q8CIK8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Rfwd3Q8CIK8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd3Q8CIK8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd3Q8CIK8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd3Q8CIK8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd3Q8CIK8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Rfwd3Q8CIK8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfwd3Q8CIK8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfwd3Q8CIK8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfwd3Q8CIK8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfwd3Q8CIK8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfwd3Q8CIK8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd3Q8CIK8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd3Q8CIK8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.88■□□□□ 0.61
Rfwd3Q8CIK8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd3Q8CIK8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd3Q8CIK8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Rfwd3Q8CIK8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd3Q8CIK8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd3Q8CIK8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd3Q8CIK8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rfwd3Q8CIK8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd3Q8CIK8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rfwd3Q8CIK8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Rfwd3Q8CIK8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd3Q8CIK8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd3Q8CIK8 Gm9847-201ENSMUST00000052528 599 ntBASIC18.87■□□□□ 0.61
Rfwd3Q8CIK8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd3Q8CIK8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd3Q8CIK8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd3Q8CIK8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd3Q8CIK8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Golgb1-201ENSMUST00000023534 498 ntBASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.86■□□□□ 0.61
Rfwd3Q8CIK8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms