Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rp1l1Q8CGM2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Rp1l1Q8CGM2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.54■■□□□ 1.04
Rp1l1Q8CGM2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rp1l1Q8CGM2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rp1l1Q8CGM2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Rp1l1Q8CGM2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rp1l1Q8CGM2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rp1l1Q8CGM2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rp1l1Q8CGM2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rp1l1Q8CGM2 Reep4-203ENSMUST00000226563 1444 ntBASIC21.53■■□□□ 1.04
Rp1l1Q8CGM2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rp1l1Q8CGM2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.52■■□□□ 1.04
Rp1l1Q8CGM2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.52■■□□□ 1.04
Rp1l1Q8CGM2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Rp1l1Q8CGM2 Gm9988-201ENSMUST00000069786 435 ntBASIC21.52■■□□□ 1.04
Rp1l1Q8CGM2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rp1l1Q8CGM2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rp1l1Q8CGM2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rp1l1Q8CGM2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
Rp1l1Q8CGM2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.52■■□□□ 1.03
Rp1l1Q8CGM2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.52■■□□□ 1.03
Rp1l1Q8CGM2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.52■■□□□ 1.03
Rp1l1Q8CGM2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rp1l1Q8CGM2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rp1l1Q8CGM2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rp1l1Q8CGM2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.51■■□□□ 1.03
Rp1l1Q8CGM2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rp1l1Q8CGM2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rp1l1Q8CGM2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Rp1l1Q8CGM2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rp1l1Q8CGM2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rp1l1Q8CGM2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rp1l1Q8CGM2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rp1l1Q8CGM2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rp1l1Q8CGM2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.5■■□□□ 1.03
Rp1l1Q8CGM2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.5■■□□□ 1.03
Rp1l1Q8CGM2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rp1l1Q8CGM2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rp1l1Q8CGM2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rp1l1Q8CGM2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rp1l1Q8CGM2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rp1l1Q8CGM2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rp1l1Q8CGM2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rp1l1Q8CGM2 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.49■■□□□ 1.03
Rp1l1Q8CGM2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.49■■□□□ 1.03
Rp1l1Q8CGM2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Rp1l1Q8CGM2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rp1l1Q8CGM2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rp1l1Q8CGM2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.48■■□□□ 1.03
Rp1l1Q8CGM2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.48■■□□□ 1.03
Rp1l1Q8CGM2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rp1l1Q8CGM2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rp1l1Q8CGM2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rp1l1Q8CGM2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rp1l1Q8CGM2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.47■■□□□ 1.03
Rp1l1Q8CGM2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rp1l1Q8CGM2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.46■■□□□ 1.03
Rp1l1Q8CGM2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
Rp1l1Q8CGM2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rp1l1Q8CGM2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Rp1l1Q8CGM2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rp1l1Q8CGM2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rp1l1Q8CGM2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rp1l1Q8CGM2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rp1l1Q8CGM2 Gm27801-201ENSMUST00000184174 223 ntBASIC21.45■■□□□ 1.02
Rp1l1Q8CGM2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.45■■□□□ 1.02
Rp1l1Q8CGM2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rp1l1Q8CGM2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rp1l1Q8CGM2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rp1l1Q8CGM2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.45■■□□□ 1.02
Rp1l1Q8CGM2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rp1l1Q8CGM2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Gm4968-201ENSMUST00000071458 858 ntBASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Rp1l1Q8CGM2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rp1l1Q8CGM2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.43■■□□□ 1.02
Rp1l1Q8CGM2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rp1l1Q8CGM2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rp1l1Q8CGM2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rp1l1Q8CGM2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rp1l1Q8CGM2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.43■■□□□ 1.02
Rp1l1Q8CGM2 Gm13148-201ENSMUST00000118892 745 ntBASIC21.43■■□□□ 1.02
Rp1l1Q8CGM2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.43■■□□□ 1.02
Rp1l1Q8CGM2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rp1l1Q8CGM2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rp1l1Q8CGM2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Rp1l1Q8CGM2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rp1l1Q8CGM2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms