Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vcpip1Q8CDG3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vcpip1Q8CDG3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Vcpip1Q8CDG3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vcpip1Q8CDG3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.74■■□□□ 1.07
Vcpip1Q8CDG3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vcpip1Q8CDG3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Vcpip1Q8CDG3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Vcpip1Q8CDG3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vcpip1Q8CDG3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.73■■□□□ 1.07
Vcpip1Q8CDG3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vcpip1Q8CDG3 Gm14117-201ENSMUST00000122417 843 ntBASIC21.73■■□□□ 1.07
Vcpip1Q8CDG3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vcpip1Q8CDG3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vcpip1Q8CDG3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vcpip1Q8CDG3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Vcpip1Q8CDG3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vcpip1Q8CDG3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vcpip1Q8CDG3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vcpip1Q8CDG3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Vcpip1Q8CDG3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vcpip1Q8CDG3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.71■■□□□ 1.07
Vcpip1Q8CDG3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Vcpip1Q8CDG3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Vcpip1Q8CDG3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vcpip1Q8CDG3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Vcpip1Q8CDG3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vcpip1Q8CDG3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.7■■□□□ 1.06
Vcpip1Q8CDG3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vcpip1Q8CDG3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.7■■□□□ 1.06
Vcpip1Q8CDG3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vcpip1Q8CDG3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vcpip1Q8CDG3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vcpip1Q8CDG3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.69■■□□□ 1.06
Vcpip1Q8CDG3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vcpip1Q8CDG3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Vcpip1Q8CDG3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vcpip1Q8CDG3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vcpip1Q8CDG3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vcpip1Q8CDG3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vcpip1Q8CDG3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Vcpip1Q8CDG3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vcpip1Q8CDG3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vcpip1Q8CDG3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Vcpip1Q8CDG3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vcpip1Q8CDG3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.68■■□□□ 1.06
Vcpip1Q8CDG3 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.68■■□□□ 1.06
Vcpip1Q8CDG3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vcpip1Q8CDG3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Vcpip1Q8CDG3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vcpip1Q8CDG3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vcpip1Q8CDG3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vcpip1Q8CDG3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vcpip1Q8CDG3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vcpip1Q8CDG3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vcpip1Q8CDG3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vcpip1Q8CDG3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vcpip1Q8CDG3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vcpip1Q8CDG3 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.67■■□□□ 1.06
Vcpip1Q8CDG3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vcpip1Q8CDG3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Vcpip1Q8CDG3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vcpip1Q8CDG3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Vcpip1Q8CDG3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vcpip1Q8CDG3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vcpip1Q8CDG3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vcpip1Q8CDG3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Vcpip1Q8CDG3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vcpip1Q8CDG3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vcpip1Q8CDG3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vcpip1Q8CDG3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.65■■□□□ 1.06
Vcpip1Q8CDG3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vcpip1Q8CDG3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.65■■□□□ 1.06
Vcpip1Q8CDG3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Vcpip1Q8CDG3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vcpip1Q8CDG3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vcpip1Q8CDG3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vcpip1Q8CDG3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vcpip1Q8CDG3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Vcpip1Q8CDG3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.64■■□□□ 1.05
Vcpip1Q8CDG3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vcpip1Q8CDG3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vcpip1Q8CDG3 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.64■■□□□ 1.05
Vcpip1Q8CDG3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Vcpip1Q8CDG3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vcpip1Q8CDG3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vcpip1Q8CDG3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vcpip1Q8CDG3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms