Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Usp44Q8C2S0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Usp44Q8C2S0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Usp44Q8C2S0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Usp44Q8C2S0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Usp44Q8C2S0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.84■■□□□ 1.41
Usp44Q8C2S0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Usp44Q8C2S0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Usp44Q8C2S0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Usp44Q8C2S0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Usp44Q8C2S0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Usp44Q8C2S0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Usp44Q8C2S0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
Usp44Q8C2S0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.83■■□□□ 1.41
Usp44Q8C2S0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Usp44Q8C2S0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Usp44Q8C2S0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Usp44Q8C2S0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
Usp44Q8C2S0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp44Q8C2S0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp44Q8C2S0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp44Q8C2S0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Usp44Q8C2S0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp44Q8C2S0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp44Q8C2S0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Usp44Q8C2S0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp44Q8C2S0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Usp44Q8C2S0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
Usp44Q8C2S0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Usp44Q8C2S0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.8■■□□□ 1.4
Usp44Q8C2S0 Gm9847-201ENSMUST00000052528 599 ntBASIC23.8■■□□□ 1.4
Usp44Q8C2S0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Usp44Q8C2S0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Usp44Q8C2S0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.8■■□□□ 1.4
Usp44Q8C2S0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Usp44Q8C2S0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Usp44Q8C2S0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Usp44Q8C2S0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp44Q8C2S0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp44Q8C2S0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp44Q8C2S0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp44Q8C2S0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp44Q8C2S0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Usp44Q8C2S0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.79■■□□□ 1.4
Usp44Q8C2S0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp44Q8C2S0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Usp44Q8C2S0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.78■■□□□ 1.4
Usp44Q8C2S0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Usp44Q8C2S0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.78■■□□□ 1.4
Usp44Q8C2S0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp44Q8C2S0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Usp44Q8C2S0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Usp44Q8C2S0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp44Q8C2S0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.78■■□□□ 1.4
Usp44Q8C2S0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp44Q8C2S0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Usp44Q8C2S0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp44Q8C2S0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Usp44Q8C2S0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp44Q8C2S0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp44Q8C2S0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Usp44Q8C2S0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp44Q8C2S0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
Usp44Q8C2S0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.77■■□□□ 1.4
Usp44Q8C2S0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp44Q8C2S0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp44Q8C2S0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Usp44Q8C2S0 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.76■■□□□ 1.39
Usp44Q8C2S0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp44Q8C2S0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
Usp44Q8C2S0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.76■■□□□ 1.39
Usp44Q8C2S0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp44Q8C2S0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp44Q8C2S0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Usp44Q8C2S0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Usp44Q8C2S0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp44Q8C2S0 Gm21956-201ENSMUST00000179946 522 ntBASIC23.74■■□□□ 1.39
Usp44Q8C2S0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp44Q8C2S0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp44Q8C2S0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Usp44Q8C2S0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp44Q8C2S0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Mir6236-201ENSMUST00000184437 123 ntBASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp44Q8C2S0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp44Q8C2S0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.72■■□□□ 1.39
Usp44Q8C2S0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Usp44Q8C2S0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp44Q8C2S0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Usp44Q8C2S0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms