Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
Ptcd1Q8C2E4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ptcd1Q8C2E4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ptcd1Q8C2E4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ptcd1Q8C2E4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ptcd1Q8C2E4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC25.02■■□□□ 1.6
Ptcd1Q8C2E4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC25.02■■□□□ 1.6
Ptcd1Q8C2E4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ptcd1Q8C2E4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ptcd1Q8C2E4 Gm32051-202ENSMUST00000197905 2385 ntBASIC25.01■■□□□ 1.59
Ptcd1Q8C2E4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC25.01■■□□□ 1.59
Ptcd1Q8C2E4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ptcd1Q8C2E4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ptcd1Q8C2E4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Ptcd1Q8C2E4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ptcd1Q8C2E4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Ptcd1Q8C2E4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC25.01■■□□□ 1.59
Ptcd1Q8C2E4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC25■■□□□ 1.59
Ptcd1Q8C2E4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ptcd1Q8C2E4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC25■■□□□ 1.59
Ptcd1Q8C2E4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC25■■□□□ 1.59
Ptcd1Q8C2E4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ptcd1Q8C2E4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ptcd1Q8C2E4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Ptcd1Q8C2E4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Ptcd1Q8C2E4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ptcd1Q8C2E4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
Ptcd1Q8C2E4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ptcd1Q8C2E4 AV356131-201ENSMUST00000206201 750 ntBASIC24.99■■□□□ 1.59
Ptcd1Q8C2E4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ptcd1Q8C2E4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Ptcd1Q8C2E4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.98■■□□□ 1.59
Ptcd1Q8C2E4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ptcd1Q8C2E4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.98■■□□□ 1.59
Ptcd1Q8C2E4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Gm43530-201ENSMUST00000195920 274 ntBASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptcd1Q8C2E4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ptcd1Q8C2E4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ptcd1Q8C2E4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ptcd1Q8C2E4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ptcd1Q8C2E4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ptcd1Q8C2E4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Ptcd1Q8C2E4 Gm10033-202ENSMUST00000211874 928 ntBASIC24.96■■□□□ 1.59
Ptcd1Q8C2E4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Ptcd1Q8C2E4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Ptcd1Q8C2E4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ptcd1Q8C2E4 Smad6-203ENSMUST00000179458 273 ntBASIC24.95■■□□□ 1.58
Ptcd1Q8C2E4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC24.95■■□□□ 1.58
Ptcd1Q8C2E4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC24.95■■□□□ 1.58
Ptcd1Q8C2E4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ptcd1Q8C2E4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ptcd1Q8C2E4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ptcd1Q8C2E4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ptcd1Q8C2E4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ptcd1Q8C2E4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ptcd1Q8C2E4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC24.94■■□□□ 1.58
Ptcd1Q8C2E4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.94■■□□□ 1.58
Ptcd1Q8C2E4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ptcd1Q8C2E4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ptcd1Q8C2E4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ptcd1Q8C2E4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC24.93■■□□□ 1.58
Ptcd1Q8C2E4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC24.93■■□□□ 1.58
Ptcd1Q8C2E4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ptcd1Q8C2E4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ptcd1Q8C2E4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ptcd1Q8C2E4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC24.92■■□□□ 1.58
Ptcd1Q8C2E4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ptcd1Q8C2E4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ptcd1Q8C2E4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ptcd1Q8C2E4 Gm42778-201ENSMUST00000199644 553 ntBASIC24.91■■□□□ 1.58
Ptcd1Q8C2E4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ptcd1Q8C2E4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC24.91■■□□□ 1.58
Ptcd1Q8C2E4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Ptcd1Q8C2E4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ptcd1Q8C2E4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC24.9■■□□□ 1.58
Ptcd1Q8C2E4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ptcd1Q8C2E4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ptcd1Q8C2E4 Gm10602-201ENSMUST00000098239 609 ntBASIC24.9■■□□□ 1.58
Ptcd1Q8C2E4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Ptcd1Q8C2E4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Ptcd1Q8C2E4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.9■■□□□ 1.58
Ptcd1Q8C2E4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ptcd1Q8C2E4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ptcd1Q8C2E4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Ptcd1Q8C2E4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Ptcd1Q8C2E4 Gm12669-201ENSMUST00000122162 1009 ntBASIC24.89■■□□□ 1.58
Ptcd1Q8C2E4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Ptcd1Q8C2E4 Gm10209-201ENSMUST00000203397 1607 ntBASIC24.89■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms