Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne1Q8C166 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne1Q8C166 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.88■□□□□ 0.61
Cpne1Q8C166 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.88■□□□□ 0.61
Cpne1Q8C166 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne1Q8C166 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne1Q8C166 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne1Q8C166 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne1Q8C166 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne1Q8C166 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne1Q8C166 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne1Q8C166 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.87■□□□□ 0.61
Cpne1Q8C166 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Cpne1Q8C166 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne1Q8C166 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne1Q8C166 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.86■□□□□ 0.61
Cpne1Q8C166 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne1Q8C166 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne1Q8C166 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne1Q8C166 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Cpne1Q8C166 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne1Q8C166 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cpne1Q8C166 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne1Q8C166 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cpne1Q8C166 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne1Q8C166 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne1Q8C166 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne1Q8C166 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cpne1Q8C166 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.84■□□□□ 0.61
Cpne1Q8C166 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.84■□□□□ 0.61
Cpne1Q8C166 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne1Q8C166 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cpne1Q8C166 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne1Q8C166 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne1Q8C166 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpne1Q8C166 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
Cpne1Q8C166 Notumos-201ENSMUST00000151998 2659 ntBASIC18.83■□□□□ 0.61
Cpne1Q8C166 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cpne1Q8C166 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpne1Q8C166 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.83■□□□□ 0.6
Cpne1Q8C166 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne1Q8C166 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne1Q8C166 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne1Q8C166 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne1Q8C166 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne1Q8C166 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Cpne1Q8C166 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne1Q8C166 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne1Q8C166 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cpne1Q8C166 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne1Q8C166 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne1Q8C166 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne1Q8C166 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.81■□□□□ 0.6
Cpne1Q8C166 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne1Q8C166 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cpne1Q8C166 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Cpne1Q8C166 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne1Q8C166 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne1Q8C166 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne1Q8C166 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne1Q8C166 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne1Q8C166 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne1Q8C166 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne1Q8C166 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.8■□□□□ 0.6
Cpne1Q8C166 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.8■□□□□ 0.6
Cpne1Q8C166 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.8■□□□□ 0.6
Cpne1Q8C166 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne1Q8C166 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne1Q8C166 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
Cpne1Q8C166 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.8■□□□□ 0.6
Cpne1Q8C166 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne1Q8C166 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne1Q8C166 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne1Q8C166 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne1Q8C166 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne1Q8C166 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.79■□□□□ 0.6
Cpne1Q8C166 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Cpne1Q8C166 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne1Q8C166 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne1Q8C166 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cpne1Q8C166 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne1Q8C166 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne1Q8C166 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne1Q8C166 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Gm12922-201ENSMUST00000120626 809 ntBASIC18.78■□□□□ 0.6
Cpne1Q8C166 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne1Q8C166 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne1Q8C166 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms