Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SprnQ8BWU1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SprnQ8BWU1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SprnQ8BWU1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SprnQ8BWU1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SprnQ8BWU1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SprnQ8BWU1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.9■□□□□ 0.46
SprnQ8BWU1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SprnQ8BWU1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SprnQ8BWU1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SprnQ8BWU1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SprnQ8BWU1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SprnQ8BWU1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SprnQ8BWU1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SprnQ8BWU1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SprnQ8BWU1 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.9■□□□□ 0.46
SprnQ8BWU1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SprnQ8BWU1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.89■□□□□ 0.46
SprnQ8BWU1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.89■□□□□ 0.46
SprnQ8BWU1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SprnQ8BWU1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SprnQ8BWU1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SprnQ8BWU1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SprnQ8BWU1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SprnQ8BWU1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SprnQ8BWU1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SprnQ8BWU1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SprnQ8BWU1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.88■□□□□ 0.45
SprnQ8BWU1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SprnQ8BWU1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.88■□□□□ 0.45
SprnQ8BWU1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SprnQ8BWU1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SprnQ8BWU1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SprnQ8BWU1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SprnQ8BWU1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SprnQ8BWU1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SprnQ8BWU1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SprnQ8BWU1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SprnQ8BWU1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SprnQ8BWU1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SprnQ8BWU1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SprnQ8BWU1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.87■□□□□ 0.45
SprnQ8BWU1 Gm5812-201ENSMUST00000061073 957 ntBASIC17.87■□□□□ 0.45
SprnQ8BWU1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SprnQ8BWU1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.87■□□□□ 0.45
SprnQ8BWU1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SprnQ8BWU1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SprnQ8BWU1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
SprnQ8BWU1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SprnQ8BWU1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.86■□□□□ 0.45
SprnQ8BWU1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SprnQ8BWU1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SprnQ8BWU1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SprnQ8BWU1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SprnQ8BWU1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SprnQ8BWU1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SprnQ8BWU1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SprnQ8BWU1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
SprnQ8BWU1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SprnQ8BWU1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.85■□□□□ 0.45
SprnQ8BWU1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SprnQ8BWU1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.85■□□□□ 0.45
SprnQ8BWU1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SprnQ8BWU1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SprnQ8BWU1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SprnQ8BWU1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
SprnQ8BWU1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SprnQ8BWU1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SprnQ8BWU1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SprnQ8BWU1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SprnQ8BWU1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SprnQ8BWU1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SprnQ8BWU1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SprnQ8BWU1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.83■□□□□ 0.44
SprnQ8BWU1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SprnQ8BWU1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms