Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nup54Q8BTS4 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.77■□□□□ 0.92
Nup54Q8BTS4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup54Q8BTS4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nup54Q8BTS4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup54Q8BTS4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup54Q8BTS4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup54Q8BTS4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nup54Q8BTS4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nup54Q8BTS4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.76■□□□□ 0.91
Nup54Q8BTS4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.76■□□□□ 0.91
Nup54Q8BTS4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nup54Q8BTS4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nup54Q8BTS4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Nup54Q8BTS4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup54Q8BTS4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nup54Q8BTS4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup54Q8BTS4 Gm27454-201ENSMUST00000185090 204 ntBASIC20.75■□□□□ 0.91
Nup54Q8BTS4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.75■□□□□ 0.91
Nup54Q8BTS4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup54Q8BTS4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup54Q8BTS4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nup54Q8BTS4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup54Q8BTS4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup54Q8BTS4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup54Q8BTS4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.74■□□□□ 0.91
Nup54Q8BTS4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.74■□□□□ 0.91
Nup54Q8BTS4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nup54Q8BTS4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup54Q8BTS4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nup54Q8BTS4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup54Q8BTS4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup54Q8BTS4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup54Q8BTS4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup54Q8BTS4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup54Q8BTS4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nup54Q8BTS4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Nup54Q8BTS4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup54Q8BTS4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup54Q8BTS4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup54Q8BTS4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup54Q8BTS4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup54Q8BTS4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup54Q8BTS4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup54Q8BTS4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup54Q8BTS4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Nup54Q8BTS4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.71■□□□□ 0.91
Nup54Q8BTS4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup54Q8BTS4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nup54Q8BTS4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.71■□□□□ 0.91
Nup54Q8BTS4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nup54Q8BTS4 Gm43137-201ENSMUST00000198052 594 ntBASIC20.71■□□□□ 0.91
Nup54Q8BTS4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup54Q8BTS4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.71■□□□□ 0.91
Nup54Q8BTS4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup54Q8BTS4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup54Q8BTS4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup54Q8BTS4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup54Q8BTS4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup54Q8BTS4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Nup54Q8BTS4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Nup54Q8BTS4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nup54Q8BTS4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nup54Q8BTS4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.7■□□□□ 0.9
Nup54Q8BTS4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup54Q8BTS4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Mir6236-201ENSMUST00000184437 123 ntBASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nup54Q8BTS4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Nup54Q8BTS4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nup54Q8BTS4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup54Q8BTS4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup54Q8BTS4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup54Q8BTS4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup54Q8BTS4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.68■□□□□ 0.9
Nup54Q8BTS4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup54Q8BTS4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup54Q8BTS4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup54Q8BTS4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup54Q8BTS4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Nup54Q8BTS4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Nup54Q8BTS4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup54Q8BTS4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup54Q8BTS4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup54Q8BTS4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup54Q8BTS4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nup54Q8BTS4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms