Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.45■■□□□ 1.02
Lig4Q8BTF7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lig4Q8BTF7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lig4Q8BTF7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.44■■□□□ 1.02
Lig4Q8BTF7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lig4Q8BTF7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.44■■□□□ 1.02
Lig4Q8BTF7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Lig4Q8BTF7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Lig4Q8BTF7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lig4Q8BTF7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lig4Q8BTF7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lig4Q8BTF7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lig4Q8BTF7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Lig4Q8BTF7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.43■■□□□ 1.02
Lig4Q8BTF7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.43■■□□□ 1.02
Lig4Q8BTF7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lig4Q8BTF7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lig4Q8BTF7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lig4Q8BTF7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lig4Q8BTF7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Lig4Q8BTF7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lig4Q8BTF7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
Lig4Q8BTF7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lig4Q8BTF7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Lig4Q8BTF7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lig4Q8BTF7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Lig4Q8BTF7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lig4Q8BTF7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lig4Q8BTF7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Lig4Q8BTF7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lig4Q8BTF7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lig4Q8BTF7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lig4Q8BTF7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lig4Q8BTF7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lig4Q8BTF7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lig4Q8BTF7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lig4Q8BTF7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Lig4Q8BTF7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.4■■□□□ 1.02
Lig4Q8BTF7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.4■■□□□ 1.02
Lig4Q8BTF7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.4■■□□□ 1.02
Lig4Q8BTF7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lig4Q8BTF7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lig4Q8BTF7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
Lig4Q8BTF7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.39■■□□□ 1.02
Lig4Q8BTF7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lig4Q8BTF7 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.39■■□□□ 1.02
Lig4Q8BTF7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lig4Q8BTF7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lig4Q8BTF7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lig4Q8BTF7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lig4Q8BTF7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Lig4Q8BTF7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lig4Q8BTF7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lig4Q8BTF7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lig4Q8BTF7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Lig4Q8BTF7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lig4Q8BTF7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lig4Q8BTF7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Lig4Q8BTF7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.38■■□□□ 1.01
Lig4Q8BTF7 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.38■■□□□ 1.01
Lig4Q8BTF7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lig4Q8BTF7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lig4Q8BTF7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.37■■□□□ 1.01
Lig4Q8BTF7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lig4Q8BTF7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lig4Q8BTF7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lig4Q8BTF7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lig4Q8BTF7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lig4Q8BTF7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lig4Q8BTF7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lig4Q8BTF7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Lig4Q8BTF7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lig4Q8BTF7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lig4Q8BTF7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.36■■□□□ 1.01
Lig4Q8BTF7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lig4Q8BTF7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lig4Q8BTF7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.34■■□□□ 1.01
Lig4Q8BTF7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.34■■□□□ 1.01
Lig4Q8BTF7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Lig4Q8BTF7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lig4Q8BTF7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lig4Q8BTF7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lig4Q8BTF7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.34■■□□□ 1.01
Lig4Q8BTF7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms